RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 FRZBQ92765 325 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 APH1AQ96BI3 265 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 HS3ST6Q96QI5 342 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 CISD1Q9NZ45 108 aaKnown RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 HSPB6O14558 160 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 PGLYRP1O75594 196 aaPredicted RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 PTBP3O95758 552 aaKnown RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 IGHG3P01860 377 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 MMP7P09237 267 aaPredicted RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 BCL2P10415 239 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 RND2P52198 227 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 PNRC1Q12796 327 aaPredicted RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 RIPPLY2Q5TAB7 128 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 ZNF295-AS1Q8N0V1 137 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 PRR18Q8N4B5 295 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 RBMXL3Q8N7X1 1067 aaKnown RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 OR56B2PQ8NGI1 322 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 PRDM14Q9GZV8 571 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 FGF23Q9GZV9 251 aaPredicted RBP14.4□□□□□ -0.1
FOXA1-201ENST00000250448 IL36RNQ9UBH0 155 aa14.4□□□□□ -0.1
FOXA1-201ENST00000250448 ARHGAP21Q5T5U3 1957 aa14.4□□□□□ -0.11
FOXA1-201ENST00000250448 ZFP92A6NM28 416 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 CTXN2P0C2S0 81 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 RNPS1Q15287 305 aaKnown RBP14.39□□□□□ -0.11
FOXA1-201ENST00000250448 ZNF787Q6DD87 383 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 LURAP1Q96LR2 239 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 ATP23Q9Y6H3 246 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 OR5H1A6NKK0 313 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 CYB5R3P00387 301 aaPredicted RBP14.39□□□□□ -0.11
FOXA1-201ENST00000250448 PRDX4Q13162 271 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 DNLZQ5SXM8 178 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 ABHD5Q8WTS1 349 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 GPR146Q96CH1 333 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 ABHD17AQ96GS6 310 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 ZNF665Q9H7R5 613 aa14.39□□□□□ -0.11
FOXA1-201ENST00000250448 ZNF71Q9NQZ8 489 aaPredicted RBP14.39□□□□□ -0.11
FOXA1-201ENST00000250448 A0A1B0GU03 582 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 ZNF503-AS2A6NEH8 195 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 CLDN34H7C241 214 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 TGOLN2O43493 480 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 HLA-HP01893 362 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 MPV17LQ2QL34 196 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 SAXO1Q8IYX7 474 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 S100PBPQ96BU1 408 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 RSG1Q9BU20 258 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 RPRMQ9NS64 109 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 CRIM1Q9NZV1 1036 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 PRR14LQ5THK1 2151 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 F2RP25116 425 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 CPEB3Q8NE35 698 aaKnown RBP14.38□□□□□ -0.11
FOXA1-201ENST00000250448 RAB40CQ96S21 281 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 SSX3Q99909 188 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 TMEM242Q9NWH2 141 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 MSRB2Q9Y3D2 182 aa14.38□□□□□ -0.11
FOXA1-201ENST00000250448 GPM6AP51674 278 aa14.37□□□□□ -0.11
FOXA1-201ENST00000250448 SLC31A2O15432 143 aa14.37□□□□□ -0.11
FOXA1-201ENST00000250448 CCL2P13500 99 aa14.37□□□□□ -0.11
FOXA1-201ENST00000250448 FABP4P15090 132 aa14.37□□□□□ -0.11
FOXA1-201ENST00000250448 S100GP29377 79 aa14.37□□□□□ -0.11
FOXA1-201ENST00000250448 LCN15Q6UWW0 184 aa14.37□□□□□ -0.11
FOXA1-201ENST00000250448 SCGB1C1Q8TD33 95 aa14.37□□□□□ -0.11
FOXA1-201ENST00000250448 KIAA1324LA8MWY0 1029 aaPredicted RBP14.36□□□□□ -0.11
FOXA1-201ENST00000250448 CNOT4O95628 575 aaKnown RBP14.36□□□□□ -0.11
FOXA1-201ENST00000250448 MBP02144 154 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 SLC25A6P12236 298 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 GAMTQ14353 236 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 IGFL3Q6UXB1 125 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 COLCA1Q6ZS62 124 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 Q6ZS92 163 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 OR51H1Q8NH63 302 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 RNASE11Q8TAA1 199 aaKnown RBP14.36□□□□□ -0.11
FOXA1-201ENST00000250448 RHOVQ96L33 236 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 VSIRQ9H7M9 311 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 TP53TG5Q9Y2B4 290 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 SPTA1P02549 2419 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 TAS2R60P59551 318 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 ZNF726P1Q15940 193 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 PCSK4Q6UW60 755 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 MBD3L1Q8WWY6 194 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 RCC1LQ96I51 464 aaKnown RBP14.36□□□□□ -0.11
FOXA1-201ENST00000250448 NEU1Q99519 415 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 SDF2L1Q9HCN8 221 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 MTCH1Q9NZJ7 389 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 INTS1Q8N201 2190 aaKnown RBP14.36□□□□□ -0.11
FOXA1-201ENST00000250448 TRAPPC2LH3BP13 241 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 SERPINE2P07093 398 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 FGF8P55075 233 aaPredicted RBP14.36□□□□□ -0.11
FOXA1-201ENST00000250448 CD81P60033 236 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 IZUMO4Q1ZYL8 232 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 C4orf17Q53FE4 359 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 ZDHHC23Q8IYP9 409 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 CNEP1R1Q8N9A8 125 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 MRPL30Q8TCC3 161 aaKnown RBP14.36□□□□□ -0.11
FOXA1-201ENST00000250448 RAXQ9Y2V3 346 aa14.36□□□□□ -0.11
FOXA1-201ENST00000250448 MKRN2OSH3BPM6 223 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 PSG2P11465 335 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 CCNOP22674 350 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 HOXC12P31275 282 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 SSX7Q7RTT5 188 aa14.35□□□□□ -0.11
FOXA1-201ENST00000250448 C14orf144Q96I85 54 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms