RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 LOC105371242A0A075B767 164 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 PPIAL4CA0A0B4J2A2 164 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 MUC21A0A0G2JKD1 596 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 MUC21A0A140T8X8 626 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 C3orf79P0CE67 100 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 PPIAL4GP0DN37 164 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 HMGA1P17096 107 aaKnown RBP11.13□□□□□ -0.63
VAMP4-201ENST00000236192 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
VAMP4-201ENST00000236192 MUC21Q5SSG8 566 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 VSTM2AQ8TAG5 236 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 GPR27Q9NS67 375 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 KCNE4Q8WWG9 221 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 GNB4Q9HAV0 340 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 HCFC1R1Q9NWW0 138 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 HILPDAQ9Y5L2 63 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 TP53BP1Q12888 1972 aaPredicted RBP11.13□□□□□ -0.63
VAMP4-201ENST00000236192 ARID1BQ8NFD5 2236 aaPredicted RBP11.13□□□□□ -0.63
VAMP4-201ENST00000236192 COX7A2P2O60397 106 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 P2RY2P41231 377 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 HSD52Q0P140 79 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 HES1Q14469 280 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
VAMP4-201ENST00000236192 SPSB3Q6PJ21 355 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 Q6ZWC4 215 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 TMEM144Q7Z5S9 345 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 CALHM1Q8IU99 346 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 PAQR4Q8N4S7 273 aaPredicted RBP11.13□□□□□ -0.63
VAMP4-201ENST00000236192 LINC01555Q8NAE3 123 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 OXGR1Q96P68 337 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 LRRC61Q9BV99 259 aa11.13□□□□□ -0.63
VAMP4-201ENST00000236192 SNAI2O43623 268 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 PRSS1P07477 247 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 EGR1P18146 543 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 CD1BP29016 333 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 ZAR1Q86SH2 424 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 OR4X2Q8NGF9 303 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 FAM234AQ9H0X4 552 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 GNG12Q9UBI6 72 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 FRG2CA6NGY1 282 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 PRRT4C9JH25 899 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 CD55P08174 381 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 F2RP25116 425 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 BMPERQ8N8U9 685 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 CACNA1CQ13936 2221 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 COL11A1P12107 1806 aaPredicted RBP11.12□□□□□ -0.63
VAMP4-201ENST00000236192 DRD1P21728 446 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 PSG9Q00887 426 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 FXYD3Q14802 87 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 C5orf17Q8NAS9 161 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 SPINT2O43291 252 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 P01737 135 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 CYBAP13498 195 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 FOXL2P58012 376 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 KCNMB1Q16558 191 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 CEACAM16Q2WEN9 425 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 TMEM249Q2WGJ8 235 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 SAMD5Q5TGI4 173 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 PQLC2Q6ZP29 291 aa11.12□□□□□ -0.63
VAMP4-201ENST00000236192 F11RQ9Y624 299 aaKnown RBP11.12□□□□□ -0.63
VAMP4-201ENST00000236192 PPIAL4EA0A075B759 164 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 LILRA1O75019 489 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 MPDU1O75352 247 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 C1QTNF9P0C862 333 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 PPIAL4FP0DN26 164 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 CAPZBP47756 277 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 METAP1P53582 386 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 C12orf76Q8N812 135 aaPredicted RBP11.11□□□□□ -0.63
VAMP4-201ENST00000236192 IGHV2-26A0A0B4J1V2 119 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 A6NJY4 79 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 BGLAPP02818 100 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 CT62P0C5K7 136 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 RIGQ13278 110 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 ZFAND6Q6FIF0 208 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 KLHDC7BQ96G42 594 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 CSRP2Q16527 193 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 DNM1P46Q6ZS02 220 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 SPSB4Q96A44 273 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 SOX21Q9Y651 276 aaPredicted RBP11.11□□□□□ -0.63
VAMP4-201ENST00000236192 ZNF236Q9UL36 1845 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 GLI3P10071 1580 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 FAM181BA6NEQ2 426 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 RAMP3O60896 148 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 Q6ZNB5 142 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 RTN4RL2Q86UN3 420 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 SSUH2Q9Y2M2 353 aa11.11□□□□□ -0.63
VAMP4-201ENST00000236192 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.1□□□□□ -0.63
VAMP4-201ENST00000236192 TYMSP04818 313 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 SLC25A5P05141 298 aaKnown RBP11.1□□□□□ -0.63
VAMP4-201ENST00000236192 POU2F2P09086 479 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 PDLIM4P50479 330 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 PRDX4Q13162 271 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 G3V3Y1 287 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 FKBP2P26885 142 aaKnown RBP11.1□□□□□ -0.63
VAMP4-201ENST00000236192 UCP2P55851 309 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 DUSP13Q9UII6 198 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 ZNF391Q9UJN7 358 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 TRAV38-1A0A0B4J264 116 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 SHISA7A6NL88 538 aa11.1□□□□□ -0.63
VAMP4-201ENST00000236192 FAM90A26D6RGX4 464 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms