RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 TRAV36DV7A0A075B6V5 113 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 DEGS1O15121 323 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 GATA2P23769 480 aaPredicted RBP11.09□□□□□ -0.63
MSH2-201ENST00000233146 CKS1BP61024 79 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 SLAQ13239 276 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 NNATQ16517 81 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 GTF2H5Q6ZYL4 71 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 TBC1D26Q86UD7 250 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 OR2V2Q96R30 315 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 RAB40CQ96S21 281 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 Q9Y3F1 56 aa11.09□□□□□ -0.63
MSH2-201ENST00000233146 DXOO77932 396 aaKnown RBP11.08□□□□□ -0.64
MSH2-201ENST00000233146 NAPSAO96009 420 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 ZNF16P17020 682 aaPredicted RBP11.08□□□□□ -0.64
MSH2-201ENST00000233146 EGR1P18146 543 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 TBR1Q16650 682 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 C5orf64Q2M2E5 130 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 TMEM25Q86YD3 366 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 TAF15Q92804 592 aaKnown RBP eCLIP11.08□□□□□ -0.64
MSH2-201ENST00000233146 Q96M66 194 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 CHRDL1Q9BU40 450 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 PILRAQ9UKJ1 303 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 PLPP3O14495 311 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 HERV-K104P61576 105 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 EIF3IQ13347 325 aaKnown RBP11.08□□□□□ -0.64
MSH2-201ENST00000233146 CXCL17Q6UXB2 119 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 FGF14Q92915 247 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 IL21Q9HBE4 155 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
MSH2-201ENST00000233146 HRKO00198 91 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 PDE6DO43924 150 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 SLC35E2P0CK97 266 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 EN2P19622 333 aaPredicted RBP11.07□□□□□ -0.64
MSH2-201ENST00000233146 ACSM6Q6P461 480 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 PRSS41Q7RTY9 318 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 OR4C12Q96R67 309 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 NDUFB4O95168 129 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 OR8I2Q8N0Y5 310 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 OR8B12Q8NGG6 310 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 NINJ1Q92982 152 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 SSBP4Q9BWG4 385 aaPredicted RBP11.07□□□□□ -0.64
MSH2-201ENST00000233146 ST20Q9HBF5 79 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 IGKV1D-43A0A0B4J1Z2 117 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 MT-ATP6P00846 226 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 OR10J4P0C629 311 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 CCL1P22362 96 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 KIAA0895LQ68EN5 471 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 ST6GALNAC6Q969X2 333 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 POM121L2Q96KW2 1035 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 CCDC3Q9BQI4 270 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 STRADBQ9C0K7 418 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 SPACA6W5XKT8 324 aa11.07□□□□□ -0.64
MSH2-201ENST00000233146 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 ZNF10P21506 573 aaPredicted RBP11.06□□□□□ -0.64
MSH2-201ENST00000233146 HNRNPA2B1P22626 353 aaKnown RBP11.06□□□□□ -0.64
MSH2-201ENST00000233146 GUCA1AP43080 201 aaPredicted RBP11.06□□□□□ -0.64
MSH2-201ENST00000233146 ADAMTSL4Q6UY14 1074 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 OR8B3Q8NGG8 313 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 OR2A5Q96R48 311 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 OR8B2Q96RD0 313 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 MBNL1Q9NR56 388 aaKnown RBP11.06□□□□□ -0.64
MSH2-201ENST00000233146 MYO7BQ6PIF6 2116 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 PPYP01298 95 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 DLX2Q07687 328 aaPredicted RBP11.06□□□□□ -0.64
MSH2-201ENST00000233146 KIAA1644Q3SXP7 199 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 Q56UQ5 140 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 SCCPDHQ8NBX0 429 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 ZNF479Q96JC4 524 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 HES4Q9HCC6 221 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 SLC22A20A6NK97 555 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 HBG1P69891 147 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 HBG2P69892 147 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 HLA-BQ31612 363 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 EBLN2Q6P2I7 272 aa11.06□□□□□ -0.64
MSH2-201ENST00000233146 C7orf71A4D174 169 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 MT-ND6P03923 174 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 NTF3P20783 257 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 CA7P43166 264 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 C17orf67Q0P5P2 114 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 TRIP6Q15654 476 aaKnown RBP11.05□□□□□ -0.64
MSH2-201ENST00000233146 ZNF439Q8NDP4 499 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 FNDC4Q9H6D8 234 aaPredicted RBP11.05□□□□□ -0.64
MSH2-201ENST00000233146 CRYAAP02489 173 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 THBS3P49746 956 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 SEC13P55735 322 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 C9orf135Q5VTT2 229 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 OR10G9Q8NGN4 311 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 OR10G7Q8NGN6 311 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
MSH2-201ENST00000233146 QTRT1Q9BXR0 403 aaKnown RBP11.05□□□□□ -0.64
MSH2-201ENST00000233146 COMMD5Q9GZQ3 224 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 NAT8BQ9UHF3 227 aa11.05□□□□□ -0.64
MSH2-201ENST00000233146 HLA-DOBP13765 273 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 NPY1RP25929 384 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 DCAF12Q5T6F0 453 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 SLC25A34Q6PIV7 304 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 DOK3Q7L591 496 aa11.04□□□□□ -0.64
MSH2-201ENST00000233146 OR10G3Q8NGC4 313 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms