RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 IL19Q9UHD0 177 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 IGHV1-45A0A0A0MS14 117 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 FBLL1A6NHQ2 334 aaKnown RBP11.57□□□□□ -0.56
NEK4-201ENST00000233027 MMDQ15546 238 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 C1orf53Q5VUE5 145 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 ASCL5Q7RTU5 278 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 SMIM12Q96EX1 92 aa11.57□□□□□ -0.56
NEK4-201ENST00000233027 OPN3Q9H1Y3 402 aaPredicted RBP11.57□□□□□ -0.56
NEK4-201ENST00000233027 ATAD5Q96QE3 1844 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 TRBV23-1A0A0A0MS06 115 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 C5orf67F2Z3F1 127 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 PGLYRP1O75594 196 aaPredicted RBP11.56□□□□□ -0.56
NEK4-201ENST00000233027 CD200R1LQ6Q8B3 271 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 COL24A1Q17RW2 1714 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 TRBV5-7A0A0A0MS05 114 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 LOC101059948A0A1B0GTJ6 334 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 M0R296 226 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 HINT1P49773 126 aaPredicted RBP11.56□□□□□ -0.56
NEK4-201ENST00000233027 GPR146Q96CH1 333 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 CRISPLD2Q9H0B8 497 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 C5orf66Q9H5L9 145 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 DNPH1O43598 174 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 BRS3P32247 399 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 FAM209BQ5JX69 171 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 WDR54Q9H977 334 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 ANKRD31Q8N7Z5 1873 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 C21orf140B9A014 251 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 RAB29O14966 203 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 NFAM1Q8NET5 270 aaPredicted RBP11.56□□□□□ -0.56
NEK4-201ENST00000233027 NPVFQ9HCQ7 196 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 FAM206AQ9NX38 181 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 GAPDHP04406 335 aaKnown RBP11.56□□□□□ -0.56
NEK4-201ENST00000233027 CCL8P80075 99 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 SERF2P84101 59 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 LHFPL6Q9Y693 200 aa11.56□□□□□ -0.56
NEK4-201ENST00000233027 CEACAM18A8MTB9 384 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 KRTCAP3Q53RY4 240 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 MIC13Q5XKP0 118 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 SLC25A47Q6Q0C1 308 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 CA11O75493 328 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 RPL31P62899 125 aaKnown RBP11.55□□□□□ -0.56
NEK4-201ENST00000233027 FXYD3Q14802 87 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 OR1P1Q8NH06 330 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 PRR7Q8TB68 274 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 CXorf65A6NEN9 183 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 ISG15P05161 165 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 COMPP49747 757 aaPredicted RBP11.55□□□□□ -0.56
NEK4-201ENST00000233027 UCP2P55851 309 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 TRIP12Q14669 1992 aaPredicted RBP11.55□□□□□ -0.56
NEK4-201ENST00000233027 C17orf51A8MQB3 221 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 FHITP49789 147 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 IBA57Q5T440 356 aaKnown RBP11.55□□□□□ -0.56
NEK4-201ENST00000233027 OR4A47Q6IF82 309 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 RABAC1Q9UI14 185 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 TUBD1Q9UJT1 453 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 TDRD15B5MCY1 1934 aaKnown RBP11.55□□□□□ -0.56
NEK4-201ENST00000233027 CA2P00918 260 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 HSPB1P04792 205 aaKnown RBP11.55□□□□□ -0.56
NEK4-201ENST00000233027 IZUMO4Q1ZYL8 232 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 ATG101Q9BSB4 218 aa11.55□□□□□ -0.56
NEK4-201ENST00000233027 K7N7A8 449 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 SPANXN1Q5VSR9 72 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 HCP5Q6MZN7 132 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 DUSP15Q9H1R2 295 aaPredicted RBP11.54□□□□□ -0.56
NEK4-201ENST00000233027 SPAARA0A1B0GVQ0 90 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 OTX1P32242 354 aaPredicted RBP11.54□□□□□ -0.56
NEK4-201ENST00000233027 HOXA4Q00056 320 aaPredicted RBP11.54□□□□□ -0.56
NEK4-201ENST00000233027 ROM1Q03395 351 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 DHRS7CA6NNS2 312 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 OR2A4O95047 310 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.54□□□□□ -0.56
NEK4-201ENST00000233027 OR2V2Q96R30 315 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 OR2A7Q96R45 310 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 P2RX4Q99571 388 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 G6PC2Q9NQR9 355 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 RSPO4Q2I0M5 234 aaPredicted RBP11.54□□□□□ -0.56
NEK4-201ENST00000233027 NHLRC3Q5JS37 347 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 SMRP1Q8NCR6 262 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 HILPDAQ9Y5L2 63 aa11.54□□□□□ -0.56
NEK4-201ENST00000233027 ZIC3O60481 467 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 CD81P60033 236 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 PAFAH1B2P68402 229 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 RELBQ01201 579 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 PQLC2Q6ZP29 291 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 TAF15Q92804 592 aaKnown RBP eCLIP11.53□□□□□ -0.56
NEK4-201ENST00000233027 AQP10Q96PS8 301 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 PPIAL4EA0A075B759 164 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 CGB1A6NKQ9 187 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 PPIAL4DF5H284 164 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 HYPMO75409 117 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 CD74P04233 296 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 PPIAL4FP0DN26 164 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 BTF3P20290 206 aaKnown RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 STXBP6Q8NFX7 210 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 ZNF714Q96N38 554 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 MRPL18Q9H0U6 180 aaKnown RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 PPIAL4AQ9Y536 164 aa11.53□□□□□ -0.56
NEK4-201ENST00000233027 RGPD3A6NKT7 1758 aaPredicted RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 COL11A1P12107 1806 aaPredicted RBP11.53□□□□□ -0.56
NEK4-201ENST00000233027 IGKV1D-42A0A075B6H8 117 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms