RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PLXNB2O15031 1838 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 ERVS71-1P61550 626 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 SELENOTP62341 195 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 ABHD12Q8N2K0 398 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 SRXN1Q9BYN0 137 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 HIST3H3Q16695 136 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 RNF151Q2KHN1 245 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 OR9G1Q8NH87 305 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 ZNF253O75346 499 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 TIAF1O95411 115 aa16.34■□□□□ 0.21
SMPD3-201ENST00000219334 APOBEC3AP31941 199 aaPredicted RBP16.34■□□□□ 0.21
SMPD3-201ENST00000219334 SCGB1D4Q6XE38 83 aa16.33■□□□□ 0.21
SMPD3-201ENST00000219334 ZNF738Q8NE65 137 aa16.33■□□□□ 0.21
SMPD3-201ENST00000219334 IGHV3OR16-12A0A075B7B8 117 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 SMIM10L1P0DMW3 83 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 ZNF137PP52743 207 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 IGSF11Q5DX21 431 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 ZNF645Q8N7E2 425 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 SMIM10Q96HG1 83 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 RNF224P0DH78 156 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 LDLRAD3Q86YD5 345 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 ABHD17AQ96GS6 310 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 CACNA1GO43497 2377 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 M0R2Z0 102 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 OR10J1P30954 320 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 LYRM7Q5U5X0 104 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 SLC35E4Q6ICL7 350 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 PRNTQ86SH4 94 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 OR52M1Q8NGK5 317 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 TMEM56-RWDD3S4R434 201 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 KIAA1217Q5T5P2 1943 aa16.33■□□□□ 0.2
SMPD3-201ENST00000219334 ZDBF2Q9HCK1 2354 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 LIMS1P48059 325 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 IRF3Q14653 427 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 Q6ZT83 130 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 SOSTQ9BQB4 213 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 RALYQ9UKM9 306 aaKnown RBP16.32■□□□□ 0.2
SMPD3-201ENST00000219334 IGLV1-36A0A0B4J1U3 117 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 COMPP49747 757 aaPredicted RBP16.32■□□□□ 0.2
SMPD3-201ENST00000219334 MFAP4P55083 255 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 RAX2Q96IS3 184 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 CLEC7AQ9BXN2 247 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 GSX1Q9H4S2 264 aaPredicted RBP16.32■□□□□ 0.2
SMPD3-201ENST00000219334 SLC25A17O43808 307 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 DEDDO75618 318 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 CTSBP07858 339 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 CEBPDP49716 269 aaPredicted RBP16.32■□□□□ 0.2
SMPD3-201ENST00000219334 DNM1P46Q6ZS02 220 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 CHRNA10Q9GZZ6 450 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 QSER1Q2KHR3 1735 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 MRPL54Q6P161 138 aaKnown RBP16.32■□□□□ 0.2
SMPD3-201ENST00000219334 GP6Q9HCN6 339 aa16.32■□□□□ 0.2
SMPD3-201ENST00000219334 FAM74A3Q4VXF1 159 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 TIMM23BQ5SRD1 257 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 FADS6Q8N9I5 356 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 LRRC75AQ8NAA5 344 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 KLK13Q9UKR3 277 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 TNS1Q9HBL0 1735 aaKnown RBP16.31■□□□□ 0.2
SMPD3-201ENST00000219334 H0Y980 276 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 SCTP09683 121 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 DLX1P56177 255 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 SYT8Q8NBV8 401 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 MIXL1Q9H2W2 232 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 SCN4AP35499 1836 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 VWA1Q6PCB0 445 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 TMEM191AQ9H0A3 160 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 LYRM2Q9NU23 88 aaPredicted RBP16.31■□□□□ 0.2
SMPD3-201ENST00000219334 DLL3Q9NYJ7 618 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 RECKO95980 971 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 NUBP1P53384 320 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 ATP5G2Q06055 141 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 LHFPL6Q9Y693 200 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 V9GYH0 126 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 NINQ8N4C6 2090 aa16.31■□□□□ 0.2
SMPD3-201ENST00000219334 ISLRO14498 428 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 TMEM30BQ3MIR4 351 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 DHRS11Q6UWP2 260 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 OVCH2Q7RTZ1 564 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 MYOZ3Q8TDC0 251 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 RD3LP0DJH9 198 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 PMS2P11Q13670 270 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 HLA-DRB5Q30154 266 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 OR2D3Q8NGH3 330 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 ZNF729A6NN14 1252 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-201ENST00000219334 J3QW42 95 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 LINC00869P0C866 280 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 IGLV3-21P80748 117 aaPredicted RBP16.3■□□□□ 0.2
SMPD3-201ENST00000219334 FUT5Q11128 374 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 SNAI3Q3KNW1 292 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 OR4B1Q8NGF8 309 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 TMEM186Q96B77 213 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 TLNRD1Q9H1K6 362 aa16.3■□□□□ 0.2
SMPD3-201ENST00000219334 CXorf66Q5JRM2 361 aaPredicted RBP16.29■□□□□ 0.2
SMPD3-201ENST00000219334 VAX1Q5SQQ9 334 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 PNKDQ8N490 385 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 OPN4Q9UHM6 478 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 TRAV30A0A087WSZ9 112 aa16.29■□□□□ 0.2
SMPD3-201ENST00000219334 FAM181BA6NEQ2 426 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms