RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 UQCC1Q9NVA1 299 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 ODAMA1E959 279 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 MC5RP33032 325 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 ENDOGQ14249 297 aaKnown RBP11.77□□□□□ -0.53
SIX4-201ENST00000216513 FADS6Q8N9I5 356 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 Q96MF0 132 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 LHFPL6Q9Y693 200 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 TRAV40A0A0B4J280 105 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 CGB1A6NKQ9 187 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 TMEM128Q5BJH2 165 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 SLC24A4Q8NFF2 622 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 SLC25A28Q96A46 364 aa11.77□□□□□ -0.53
SIX4-201ENST00000216513 NPIPB8E9PQR5 432 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 SLC25A17O43808 307 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 MST1P26927 711 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 CNN1P51911 297 aaKnown RBP11.76□□□□□ -0.53
SIX4-201ENST00000216513 FAM3AP98173 230 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 Q6ZS92 163 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 RTTNQ86VV8 2226 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 GPR179Q6PRD1 2367 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 COLCA1Q6ZS62 124 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 OVCH2Q7RTZ1 564 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 AMELYQ99218 206 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 NPFFR1Q9GZQ6 430 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 RALGAPA2Q2PPJ7 1873 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 DOCK8Q8NF50 2099 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 ZFC3H1O60293 1989 aaKnown RBP11.76□□□□□ -0.53
SIX4-201ENST00000216513 FAM181BA6NEQ2 426 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 BCL2L11O43521 198 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 CAMPP49913 170 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 NANOS3P60323 173 aaKnown RBP11.76□□□□□ -0.53
SIX4-201ENST00000216513 Q1RN00 199 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 FAM216BQ8N7L0 139 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 SCMH1Q96GD3 660 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 MRPL37Q9BZE1 423 aaKnown RBP11.76□□□□□ -0.53
SIX4-201ENST00000216513 GAR1Q9NY12 217 aaKnown RBP11.76□□□□□ -0.53
SIX4-201ENST00000216513 TMSB15BA0A087X1C1 80 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 A0A0U1RQV5 110 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 MBP02144 154 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 THY1P04216 161 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 PTBP1P26599 531 aaKnown RBP eCLIP11.76□□□□□ -0.53
SIX4-201ENST00000216513 TIMP3P35625 211 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 WNT5AP41221 380 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 SLC38A11Q08AI6 406 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 IGHV3-48P01763 117 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 ZNF429Q86V71 674 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 MRPL24Q96A35 216 aaKnown RBP11.76□□□□□ -0.53
SIX4-201ENST00000216513 NEURL2Q9BR09 285 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 ZDHHC11Q9H8X9 412 aa11.76□□□□□ -0.53
SIX4-201ENST00000216513 J3QR06 171 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 ANXA10Q9UJ72 324 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 MMP16P51512 607 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 OR4B1Q8NGF8 309 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 BTF3L4Q96K17 158 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 LURAP1Q96LR2 239 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 MIXL1Q9H2W2 232 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 TCRBV4S1A1TA0A5B7 111 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 CA11O75493 328 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 IGHA1P01876 353 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 PPOXP50336 477 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 RNASEKQ6P5S7 137 aaKnown RBP11.75□□□□□ -0.53
SIX4-201ENST00000216513 COX5BP10606 129 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 FAM24BQ8N5W8 94 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 OR4A4PQ8NGN8 299 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 OR2T10Q8NGZ9 312 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 C8orf46Q8TAG6 207 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 PLEKHA2Q9HB19 425 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 TICRRQ7Z2Z1 1910 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 TRGV3P03979 118 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 RCC1P18754 421 aaPredicted RBP11.75□□□□□ -0.53
SIX4-201ENST00000216513 GLIPR1P48060 266 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 EFNA4P52798 201 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 FGF12P61328 243 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 ROM1Q03395 351 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 TM4SF20Q53R12 229 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 OR2W1Q9Y3N9 320 aa11.75□□□□□ -0.53
SIX4-201ENST00000216513 OR1L1Q8NH94 360 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 NAA60Q9H7X0 242 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 HSF4Q9ULV5 492 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 RNASEK-C17orf49H0YIS7 233 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 UQCRFS1P47985 274 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 MOGAT2Q3SYC2 334 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 METTL26Q96S19 204 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 KIAA1324LA8MWY0 1029 aaPredicted RBP11.74□□□□□ -0.53
SIX4-201ENST00000216513 H0YL77 283 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 ALX3O95076 343 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 HPXP02790 462 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 FNDC1Q4ZHG4 1894 aaPredicted RBP11.74□□□□□ -0.53
SIX4-201ENST00000216513 CD200P41217 278 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 C16orf82Q7Z2V1 217 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 LYZL2Q7Z4W2 148 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 GLRX5Q86SX6 157 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 SEMA5BQ9P283 1151 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 MRPS18CQ9Y3D5 142 aaKnown RBP11.74□□□□□ -0.53
SIX4-201ENST00000216513 IGHV3-35A0A0C4DH35 117 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 COL8A1P27658 744 aa11.74□□□□□ -0.53
SIX4-201ENST00000216513 NDUFB6O95139 128 aa11.73□□□□□ -0.53
SIX4-201ENST00000216513 MUC1P15941 1255 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms