RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 FGF23Q9GZV9 251 aaPredicted RBP17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 IL36GQ9NZH8 169 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 TRAPPC2LQ9UL33 140 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 C11orf94C9JXX5 98 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 BTF3P20290 206 aaKnown RBP17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 GOLT1BQ9Y3E0 138 aa17.06■□□□□ 0.32
PPP1R3F-201ENST00000055335 IGLV3-19P01714 112 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 TFF3Q07654 80 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 SPATA46Q5T0L3 261 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 ABLIM2Q6H8Q1 611 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 OCIAD1Q9NX40 245 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 IGLV3-12A0A075B6K2 115 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 CTXN2P0C2S0 81 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 C1QTNF9P0C862 333 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 RAC1P63000 192 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 TGFBR3Q03167 851 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 SYT13Q7L8C5 426 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 G6PCP35575 357 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 TFPI2P48307 235 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 THBS3P49746 956 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 TDGF1P3P51864 188 aa17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 PSMG3Q9BT73 122 aaPredicted RBP17.05■□□□□ 0.32
PPP1R3F-201ENST00000055335 GTF3C1Q12789 2109 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 NDUFB4O95168 129 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 HPRT1P00492 218 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 GCSAMLQ5JQS6 135 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 FAM53AQ6NSI3 398 aaPredicted RBP17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 FOXL2NBQ6ZUU3 175 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 GBGT1Q8N5D6 347 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 SGMS2Q8NHU3 365 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 FAM103A1Q9BTL3 118 aaKnown RBP17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 TMEM208Q9BTX3 173 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 SVILO95425 2214 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 PAX1P15863 534 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 FKBP2P26885 142 aaKnown RBP17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 HOXA6P31267 233 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 OR3A1P47881 315 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 SSR4P51571 173 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 ACTL10Q5JWF8 245 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 Q6ZSR3 168 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 OR5P3Q8WZ94 311 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 MANBALQ9NQG1 85 aa17.04■□□□□ 0.32
PPP1R3F-201ENST00000055335 IRF2P14316 349 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 CCL7P80098 99 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 TGIF2LYQ8IUE0 185 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 FGFRL1Q8N441 504 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 OR10D3Q8NH80 312 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 VN1R17PQ8TDU5 208 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 NEIL1Q96FI4 390 aaPredicted RBP17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 TRAV38-1A0A0B4J264 116 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 RFPL3SP0C7P2 107 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 CCKARP32238 428 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 PPP1CBP62140 327 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 ZNF324BQ6AW86 544 aaPredicted RBP17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 CPT1CQ8TCG5 803 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 ZDHHC16Q969W1 377 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 TMEM9BQ9NQ34 198 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 SPINK4O60575 86 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 LILRA1O75019 489 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 RHBDL1O75783 438 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 FOXG1P55316 489 aaPredicted RBP17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 RAC3P60763 192 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 PCBD1P61457 104 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 RPS19BP1Q86WX3 136 aaKnown RBP17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 RNF138Q8WVD3 245 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 ZDHHC11Q9H8X9 412 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 GPR35Q9HC97 309 aa17.03■□□□□ 0.32
PPP1R3F-201ENST00000055335 CEACAM6P40199 344 aa17.02■□□□□ 0.32
PPP1R3F-201ENST00000055335 ATP5G3P48201 142 aa17.02■□□□□ 0.32
PPP1R3F-201ENST00000055335 DNASE2BQ8WZ79 361 aa17.02■□□□□ 0.32
PPP1R3F-201ENST00000055335 PYGO2Q9BRQ0 406 aa17.02■□□□□ 0.32
PPP1R3F-201ENST00000055335 DCAF16Q9NXF7 216 aa17.02■□□□□ 0.32
PPP1R3F-201ENST00000055335 DEGS1O15121 323 aa17.02■□□□□ 0.32
PPP1R3F-201ENST00000055335 FBXO46Q6PJ61 603 aaPredicted RBP17.02■□□□□ 0.32
PPP1R3F-201ENST00000055335 EXPH5Q8NEV8 1989 aa17.02■□□□□ 0.32
PPP1R3F-201ENST00000055335 EDDM3BP56851 147 aa17.02■□□□□ 0.31
PPP1R3F-201ENST00000055335 ARF1P84077 181 aaKnown RBP17.02■□□□□ 0.31
PPP1R3F-201ENST00000055335 CTXND1A0A1B0GTU2 59 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 A0A1B0GWJ7 208 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 RAMP3O60896 148 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 SERPINA7P05543 415 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 OR5I1Q13606 314 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 WDR74Q6RFH5 385 aaPredicted RBP17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 CMTM2Q8TAZ6 248 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 A0A1W2PQM1 296 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 DMRTA1Q5VZB9 504 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 KMT5CQ86Y97 462 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 CISD2Q8N5K1 135 aaKnown RBP17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 ANAPC16Q96DE5 110 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 PLPPR2Q96GM1 343 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 SAMD10Q9BYL1 202 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 RYDENQ9NUL5 291 aaKnown RBP17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 PPIAL4AQ9Y536 164 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 TRAV24A0A0B4J272 114 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 RPLP1P05386 114 aaKnown RBP17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 OR10J1P30954 320 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 LINC00205P59089 165 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 CCDC74BQ96LY2 380 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 PROK2Q9HC23 129 aa17.01■□□□□ 0.31
PPP1R3F-201ENST00000055335 PI4KAP42356 2102 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms