RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TMEM267Q0VDI3 215 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-229ENST00000641891 SMUG1Q53HV7 270 aa14.23□□□□□ -0.13
PHGDH-229ENST00000641891 C1orf185Q5T7R7 199 aa14.23□□□□□ -0.13
PHGDH-229ENST00000641891 ZNF808Q8N4W9 903 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-229ENST00000641891 CD177Q8N6Q3 437 aa14.23□□□□□ -0.13
PHGDH-229ENST00000641891 FAM213BQ8TBF2 198 aa14.23□□□□□ -0.13
PHGDH-229ENST00000641891 GALMQ96C23 342 aa14.23□□□□□ -0.13
PHGDH-229ENST00000641891 OR2D2Q9H210 308 aa14.23□□□□□ -0.13
PHGDH-229ENST00000641891 WASF3Q9UPY6 502 aa14.23□□□□□ -0.13
PHGDH-229ENST00000641891 CHD3Q12873 2000 aaKnown RBP14.22□□□□□ -0.13
PHGDH-229ENST00000641891 MMP9P14780 707 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 TUBG1P23258 451 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 IL2RGP31785 369 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 SSTR5P35346 364 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 DVL1P1P54792 670 aaPredicted RBP14.22□□□□□ -0.13
PHGDH-229ENST00000641891 ZNF266Q14584 549 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 OR2B11Q5JQS5 317 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 KRBOX4Q5JUW0 171 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 PRR7Q8TB68 274 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 DCTN5Q9BTE1 182 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 TUBG2Q9NRH3 451 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 LIN7CQ9NUP9 197 aaKnown RBP14.22□□□□□ -0.13
PHGDH-229ENST00000641891 OOEPA6NGQ2 149 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 K7N7A8 449 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 IAPPP10997 89 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 PPP1CCP36873 323 aaKnown RBP14.22□□□□□ -0.13
PHGDH-229ENST00000641891 RUNX1Q01196 453 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 SMIM21Q3B7S5 101 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 VHLLQ6RSH7 139 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 OR13A1Q8NGR1 328 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 OR2G3Q8NGZ4 309 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 SCRT1Q9BWW7 348 aa14.22□□□□□ -0.13
PHGDH-229ENST00000641891 ZFHX2Q9C0A1 2572 aaPredicted RBP14.21□□□□□ -0.13
PHGDH-229ENST00000641891 HEATR1Q9H583 2144 aaKnown RBP14.21□□□□□ -0.13
PHGDH-229ENST00000641891 IGHV3-43A0A0B4J1X8 118 aa14.21□□□□□ -0.13
PHGDH-229ENST00000641891 A0A1B0GWJ7 208 aa14.21□□□□□ -0.13
PHGDH-229ENST00000641891 IGHV3-43DP0DP04 118 aa14.21□□□□□ -0.13
PHGDH-229ENST00000641891 SLC25A6P12236 298 aa14.21□□□□□ -0.13
PHGDH-229ENST00000641891 EIF2S3P41091 472 aaKnown RBP14.21□□□□□ -0.13
PHGDH-229ENST00000641891 NBL1P41271 181 aa14.21□□□□□ -0.13
PHGDH-229ENST00000641891 LSM10Q969L4 123 aaKnown RBP14.21□□□□□ -0.13
PHGDH-229ENST00000641891 RAMP3O60896 148 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 RPL30P62888 115 aaKnown RBP14.2□□□□□ -0.14
PHGDH-229ENST00000641891 ZNF645Q8N7E2 425 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 FAM169BQ8N8A8 192 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 RFESDQ8TAC1 157 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 STRAPQ9Y3F4 350 aaKnown RBP14.2□□□□□ -0.14
PHGDH-229ENST00000641891 IGHV3OR15-7A0A075B7D8 119 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 NFYBP25208 207 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 PPT1P50897 306 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 RAB5CP51148 216 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 BAXQ07812 192 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 EDDM3AQ14507 147 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 GUK1Q16774 197 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 TIMM23BQ5SRD1 257 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 BTNL3Q6UXE8 466 aa14.2□□□□□ -0.14
PHGDH-229ENST00000641891 SNIP1Q8TAD8 396 aaKnown RBP14.2□□□□□ -0.14
PHGDH-229ENST00000641891 TXNL1O43396 289 aa14.19□□□□□ -0.14
PHGDH-229ENST00000641891 SNAPINO95295 136 aa14.19□□□□□ -0.14
PHGDH-229ENST00000641891 C22orf34Q6ZV56 151 aa14.19□□□□□ -0.14
PHGDH-229ENST00000641891 CLRN3Q8NCR9 226 aa14.19□□□□□ -0.14
PHGDH-229ENST00000641891 DEFB108AA8MXU0 73 aa14.19□□□□□ -0.14
PHGDH-229ENST00000641891 PRDX2P32119 198 aa14.19□□□□□ -0.14
PHGDH-229ENST00000641891 LTC4SQ16873 150 aa14.19□□□□□ -0.14
PHGDH-229ENST00000641891 ATP5SQ99766 215 aa14.19□□□□□ -0.14
PHGDH-229ENST00000641891 IGKV1D-17A0A075B6S4 117 aa14.18□□□□□ -0.14
PHGDH-229ENST00000641891 IFNL4K9M1U5 179 aa14.18□□□□□ -0.14
PHGDH-229ENST00000641891 GPR37O15354 613 aa14.18□□□□□ -0.14
PHGDH-229ENST00000641891 SYNGR2O43760 224 aa14.18□□□□□ -0.14
PHGDH-229ENST00000641891 LINC00205P59089 165 aa14.18□□□□□ -0.14
PHGDH-229ENST00000641891 RPL23AP62750 156 aaKnown RBP14.18□□□□□ -0.14
PHGDH-229ENST00000641891 ZNF816Q0VGE8 651 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-229ENST00000641891 EIF4EBP1Q13541 118 aaPredicted RBP14.18□□□□□ -0.14
PHGDH-229ENST00000641891 FGFRL1Q8N441 504 aa14.18□□□□□ -0.14
PHGDH-229ENST00000641891 RAB40CQ96S21 281 aa14.18□□□□□ -0.14
PHGDH-229ENST00000641891 EIF5A2Q9GZV4 153 aaKnown RBP14.18□□□□□ -0.14
PHGDH-229ENST00000641891 RIF1Q5UIP0 2472 aaKnown RBP14.18□□□□□ -0.14
PHGDH-229ENST00000641891 ATP6V1G2-DDX39BF2Z307 99 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 CRYABP02511 175 aaKnown RBP14.17□□□□□ -0.14
PHGDH-229ENST00000641891 CD200P41217 278 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 CCL20P78556 96 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 FAM27E3Q08E93 113 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 STX12Q86Y82 276 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 NINJ1Q92982 152 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 OR2V2Q96R30 315 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 RNF212BA8MTL3 300 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 SRRM5B3KS81 715 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 TOR1AO14656 332 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 SPRY3O43610 288 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 CRYAAP02489 173 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 METTL15P1P0C7V9 234 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 G6PCP35575 357 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 TIMP3P35625 211 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 SULT1A1P50225 295 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 BRWD1-AS2P59051 145 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 ARL16Q0P5N6 197 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 DHRS7BQ6IAN0 325 aaPredicted RBP14.17□□□□□ -0.14
PHGDH-229ENST00000641891 ETV3LQ6ZN32 361 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 MOGAT3Q86VF5 341 aa14.17□□□□□ -0.14
PHGDH-229ENST00000641891 C1orf174Q8IYL3 243 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms