RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 ARSJQ5FYB0 599 aaPredicted RBP13.81□□□□□ -0.2
PHGDH-227ENST00000641811 C16orf82Q7Z2V1 217 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 LYG1Q8N1E2 194 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 C11orf44Q8N8P7 122 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 YIPF6Q96EC8 236 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 ABHD14AQ9BUJ0 271 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 PARP12Q9H0J9 701 aaKnown RBP13.81□□□□□ -0.2
PHGDH-227ENST00000641811 Q9N2K0 584 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 VCX3AQ9NNX9 186 aa13.81□□□□□ -0.2
PHGDH-227ENST00000641811 TRIM64CA6NLI5 447 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 ZNF736B4DX44 427 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-227ENST00000641811 YPEL1O60688 119 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 SCTP09683 121 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 TMEM11P17152 192 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 ZNF137PP52743 207 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 HLA-DRB3P79483 266 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 PRR31Q5SQ13 230 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 STEAP3Q658P3 488 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 LGALS14Q8TCE9 139 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 PTX4Q96A99 478 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 AKR1E2Q96JD6 320 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 YPEL2Q96QA6 119 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 OR1A1Q9P1Q5 309 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 ELF5Q9UKW6 265 aaPredicted RBP13.8□□□□□ -0.2
PHGDH-227ENST00000641811 VWFP04275 2813 aa13.8□□□□□ -0.2
PHGDH-227ENST00000641811 METTL21EPA6NDL7 271 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 MFNGO00587 321 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 RGS11O94810 467 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 LPLP06858 475 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 CD3GP09693 182 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 HIST1H1DP16402 221 aaKnown RBP13.79□□□□□ -0.2
PHGDH-227ENST00000641811 OR3A3P47888 321 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 LSM3P62310 102 aaKnown RBP13.79□□□□□ -0.2
PHGDH-227ENST00000641811 C11orf88Q6PI97 169 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 TGIF2LXQ8IUE1 241 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 ODF3L1Q8IXM7 274 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 DTX3Q8N9I9 347 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 MAFIPQ8WZ33 124 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 SLC23A1Q9UHI7 598 aa13.79□□□□□ -0.2
PHGDH-227ENST00000641811 IGKV1-6A0A0C4DH72 117 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 ST8SIA5O15466 376 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 AIREO43918 545 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 VDAC2P45880 294 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-227ENST00000641811 EBI3Q14213 229 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 HERPUD1Q15011 391 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 C9orf152Q5JTZ5 239 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 LY6G6FQ5SQ64 297 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 IDNKQ5T6J7 187 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 OR2AK2Q8NG84 335 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 OR5H6Q8NGV6 325 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 EAF1Q96JC9 268 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-227ENST00000641811 ZNF230Q9UIE0 474 aaPredicted RBP13.78□□□□□ -0.2
PHGDH-227ENST00000641811 MOB4Q9Y3A3 225 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 MGAM2Q2M2H8 2515 aa13.78□□□□□ -0.2
PHGDH-227ENST00000641811 TRDCB7Z8K6 153 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 LANCL1O43813 399 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 FCGR3AP08637 254 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 CD1BP29016 333 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 CEACAM6P40199 344 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 MRPS15P82914 257 aaKnown RBP13.77□□□□□ -0.21
PHGDH-227ENST00000641811 TIMM50Q3ZCQ8 353 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 CDNFQ49AH0 187 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 IZUMO1Q8IYV9 350 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 WNT10AQ9GZT5 417 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 IFI27L2Q9H2X8 130 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 MGAT4AQ9UM21 535 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 TRRAPQ9Y4A5 3859 aa13.77□□□□□ -0.21
PHGDH-227ENST00000641811 SAA2-SAA4A0A096LPE2 208 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 M0QZK8 103 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 HSPA12AO43301 675 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 PEX14O75381 377 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 SAA2P0DJI9 122 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-227ENST00000641811 SMIM18P0DKX4 95 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 CD28P10747 220 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 ARFRP1Q13795 201 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 Q8N6K4 173 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 C5orf56Q8N8D9 126 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 OR2T10Q8NGZ9 312 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 WIPF2Q8TF74 440 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-227ENST00000641811 MRPL20Q9BYC9 149 aaKnown RBP13.76□□□□□ -0.21
PHGDH-227ENST00000641811 C11orf54Q9H0W9 315 aaPredicted RBP13.76□□□□□ -0.21
PHGDH-227ENST00000641811 RHBDL2Q9NX52 303 aa13.76□□□□□ -0.21
PHGDH-227ENST00000641811 SERPINE3A8MV23 424 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 M0QZ24 198 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 TXNL1O43396 289 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 GSTT2P0CG29 244 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 GSTT2BP0CG30 244 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 ZBTB25P24278 435 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 RPS19P39019 145 aaKnown RBP13.75□□□□□ -0.21
PHGDH-227ENST00000641811 LSAMPQ13449 338 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 RPL39P5Q59GN2 51 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 IGSF11Q5DX21 431 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 TREML4Q6UXN2 200 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 ZNF833PQ6ZTB9 187 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 SLC25A38Q96DW6 304 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 ABHD14BQ96IU4 210 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 FUNDC2Q9BWH2 189 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 RNF150Q9ULK6 438 aa13.75□□□□□ -0.21
PHGDH-227ENST00000641811 IGKV1D-8A0A087WSZ0 117 aa13.74□□□□□ -0.21
PHGDH-227ENST00000641811 NCBP2LA6PVI3 153 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms