RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ETV7Q9Y603 341 aa21.35■■□□□ 1.01
VEGFA-231ENST00000640499 IGHV1-3A0A0C4DH29 117 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 A0A1B0GUS0 222 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 SERPINE3A8MV23 424 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 CD3GP09693 182 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 MNDAP41218 407 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 BLCAPP62952 87 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 ZNF260Q3ZCT1 412 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 THNSL2Q86YJ6 484 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 OR8H3Q8N146 312 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 RTN4IP1Q8WWV3 396 aaPredicted RBP21.34■■□□□ 1.01
VEGFA-231ENST00000640499 WFDC12Q8WWY7 111 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 RNF114Q9Y508 228 aa21.34■■□□□ 1.01
VEGFA-231ENST00000640499 IGKV1D-8A0A087WSZ0 117 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 TRDCB7Z8K6 153 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 TMEM127O75204 238 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 GABARAPO95166 117 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 GAPDHP04406 335 aaKnown RBP21.33■■□□□ 1.01
VEGFA-231ENST00000640499 SNRNP70P08621 437 aaKnown RBP21.33■■□□□ 1.01
VEGFA-231ENST00000640499 SERPINB10P48595 397 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 GPR107Q5VW38 600 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 CAPSLQ8WWF8 208 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 MAFIPQ8WZ33 124 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 SLC25A46Q96AG3 418 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 ABHD14AQ9BUJ0 271 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 IFI27L2Q9H2X8 130 aa21.33■■□□□ 1.01
VEGFA-231ENST00000640499 RANBP3Q9H6Z4 567 aaPredicted RBP21.33■■□□□ 1.01
VEGFA-231ENST00000640499 AMY1AP04745 511 aa21.32■■□□□ 1
VEGFA-231ENST00000640499 AMY2AP04746 511 aa21.32■■□□□ 1
VEGFA-231ENST00000640499 LYG1Q8N1E2 194 aa21.32■■□□□ 1
VEGFA-231ENST00000640499 Q8N2B8 174 aa21.32■■□□□ 1
VEGFA-231ENST00000640499 RBM14Q96PK6 669 aaKnown RBP21.32■■□□□ 1
VEGFA-231ENST00000640499 NPFFR1Q9GZQ6 430 aa21.32■■□□□ 1
VEGFA-231ENST00000640499 MGAT4AQ9UM21 535 aa21.32■■□□□ 1
VEGFA-231ENST00000640499 IGHV3-72A0A0B4J1Y9 119 aa21.31■■□□□ 1
VEGFA-231ENST00000640499 ZNF736B4DX44 427 aaPredicted RBP21.31■■□□□ 1
VEGFA-231ENST00000640499 SSX5O60225 188 aa21.31■■□□□ 1
VEGFA-231ENST00000640499 GSTT2P0CG29 244 aa21.31■■□□□ 1
VEGFA-231ENST00000640499 GSTT2BP0CG30 244 aa21.31■■□□□ 1
VEGFA-231ENST00000640499 HACD4Q5VWC8 232 aa21.31■■□□□ 1
VEGFA-231ENST00000640499 CROCCP3Q8IVE0 287 aa21.31■■□□□ 1
VEGFA-231ENST00000640499 AGMATQ9BSE5 352 aa21.31■■□□□ 1
VEGFA-231ENST00000640499 SLC23A1Q9UHI7 598 aa21.31■■□□□ 1
VEGFA-231ENST00000640499 TMEM235A6NFC5 223 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 RGS11O94810 467 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 OR2F2O95006 317 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 IL3RAP26951 378 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 OR3A3P47888 321 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 ARHGDIBP52566 201 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 ARFRP1Q13795 201 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 EBI3Q14213 229 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 MOB3BQ86TA1 216 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 OR4C13Q8NGP0 309 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 ZNF251Q9BRH9 671 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 SLC25A33Q9BSK2 321 aa21.3■■□□□ 1
VEGFA-231ENST00000640499 ST8SIA5O15466 376 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 FABP7O15540 132 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 LANCL1O43813 399 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 GSTP1P09211 210 aaKnown RBP21.29■■□□□ 1
VEGFA-231ENST00000640499 FAM106CPP0CH98 169 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 CEACAM6P40199 344 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 SRSF7Q16629 238 aaKnown RBP eCLIP21.29■■□□□ 17e-11■□□□□ 10.2
VEGFA-231ENST00000640499 IGSF11Q5DX21 431 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 Q6ZS49 121 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 IZUMO1Q8IYV9 350 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 NUDCD2Q8WVJ2 157 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 C11orf54Q9H0W9 315 aaPredicted RBP21.29■■□□□ 1
VEGFA-231ENST00000640499 SERTAD4Q9NUC0 356 aa21.29■■□□□ 1
VEGFA-231ENST00000640499 HAX1O00165 279 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 IGKV1D-33P01593 117 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 IGKV1-33P01594 117 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 ZBTB25P24278 435 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 ARL6IP1Q15041 203 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 SHISA2Q6UWI4 295 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 ZNF833PQ6ZTB9 187 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 C16orf82Q7Z2V1 217 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 GPR141Q7Z602 305 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 Q8N6K4 173 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 OR2AK2Q8NG84 335 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 OR4A4PQ8NGN8 299 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 CABLES2Q9BTV7 478 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 TOLLIPQ9H0E2 274 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 ABCG5Q9H222 651 aa21.28■■□□□ 1
VEGFA-231ENST00000640499 TRAV18A0A075B6X5 111 aa21.27■■□□□ 1
VEGFA-231ENST00000640499 SAA2-SAA4A0A096LPE2 208 aa21.27■■□□□ 1
VEGFA-231ENST00000640499 SH2D7A6NKC9 451 aaPredicted RBP21.27■■□□□ 1
VEGFA-231ENST00000640499 ITGB1BP1O14713 200 aa21.27■■□□□ 1
VEGFA-231ENST00000640499 PROP1O75360 226 aa21.27■■□□□ 1
VEGFA-231ENST00000640499 SCGNO76038 276 aa21.27■■□□□ 1
VEGFA-231ENST00000640499 SAA2P0DJI9 122 aaPredicted RBP21.27■■□□□ 1
VEGFA-231ENST00000640499 DTYMKP23919 212 aa21.27■■□□□ 1
VEGFA-231ENST00000640499 MRPS15P82914 257 aaKnown RBP21.27■■□□□ 1
VEGFA-231ENST00000640499 HNF4GQ14541 408 aa21.27■■□□□ 1
VEGFA-231ENST00000640499 TGIF2LXQ8IUE1 241 aa21.27■■□□□ 1
VEGFA-231ENST00000640499 EAF1Q96JC9 268 aaPredicted RBP21.27■■□□□ 1
VEGFA-231ENST00000640499 PTHLHP12272 177 aa21.26■□□□□ 0.99
VEGFA-231ENST00000640499 PNLIPRP3Q17RR3 467 aa21.26■□□□□ 0.99
VEGFA-231ENST00000640499 DTX3Q8N9I9 347 aa21.26■□□□□ 0.99
VEGFA-231ENST00000640499 ABHD14BQ96IU4 210 aa21.26■□□□□ 0.99
VEGFA-231ENST00000640499 CITED1Q99966 193 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms