RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 DPPA3Q6W0C5 159 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 OR4P4Q8NGL7 312 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 TMEM56Q96MV1 263 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 ARL2-SNX15V9GYD0 113 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 COX6A1P12074 109 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 AMTP48728 403 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 TNFAIP6P98066 277 aaPredicted RBP14.34□□□□□ -0.11
SCARB2-210ENST00000638567 ZBTB34Q8NCN2 500 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 FGF11Q92914 225 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 CHRDL1Q9BU40 450 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 DLL3Q9NYJ7 618 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 ESPL1Q14674 2120 aa14.34□□□□□ -0.11
SCARB2-210ENST00000638567 C16orf82Q7Z2V1 217 aa14.33□□□□□ -0.11
SCARB2-210ENST00000638567 KLHDC1Q8N7A1 406 aa14.33□□□□□ -0.11
SCARB2-210ENST00000638567 OR4C12Q96R67 309 aa14.33□□□□□ -0.11
SCARB2-210ENST00000638567 FAM90A10PA6NDY2 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A18PA6NE21 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A16PA6NEW6 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A20PA6NIJ5 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A8PA6NJQ4 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A7PA6NKC0 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A22PA8MWA6 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A12PA8MX19 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A5PA8MXJ8 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A23PA8MXZ1 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 E9PQ18 207 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A15PP0C7V4 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A13PP0C7W8 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A14PP0C7W9 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 FAM90A24PP0C7X0 464 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 RANP62826 216 aaKnown RBP14.33□□□□□ -0.12
SCARB2-210ENST00000638567 MEF2BQ02080 365 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-210ENST00000638567 SMIM15Q7Z3B0 74 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 ZNF837Q96EG3 531 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-210ENST00000638567 TREM2Q9NZC2 230 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 CHCHD2Q9Y6H1 151 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-210ENST00000638567 C21orf140B9A014 251 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 CYB5R3P00387 301 aaPredicted RBP14.33□□□□□ -0.12
SCARB2-210ENST00000638567 B2MP61769 119 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 OR52L2PQ8NGH6 319 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 OR5D13Q8NGL4 314 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 POM121Q96HA1 1249 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 ZMAT5Q9UDW3 170 aaKnown RBP14.33□□□□□ -0.12
SCARB2-210ENST00000638567 TCF20Q9UGU0 1960 aaKnown RBP14.33□□□□□ -0.12
SCARB2-210ENST00000638567 DBX1A6NMT0 343 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 NDUFB3O43676 98 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 OR2H2O95918 312 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 SP1P08047 785 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 CHRNB4P30926 498 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 PAX5Q02548 391 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 VMA21Q3ZAQ7 101 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 MEGF10Q96KG7 1140 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 MRPL13Q9BYD1 178 aaKnown RBP14.33□□□□□ -0.12
SCARB2-210ENST00000638567 GPR61Q9BZJ8 451 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 ZNF319Q9P2F9 582 aa14.33□□□□□ -0.12
SCARB2-210ENST00000638567 SPTBN1Q01082 2364 aaKnown RBP14.32□□□□□ -0.12
SCARB2-210ENST00000638567 CSN1S1P47710 185 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 SPEM2Q0P670 501 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 PSG5Q15238 335 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 SLC24A4Q8NFF2 622 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 ABHD14BQ96IU4 210 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 PLXNA3P51805 1871 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 TRAV34A0A0B4J273 112 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 RRP8O43159 456 aaKnown RBP14.32□□□□□ -0.12
SCARB2-210ENST00000638567 S100A7P31151 101 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 HOXA6P31267 233 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 UCP3P55916 312 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 MOGAT3Q86VF5 341 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 FGFRL1Q8N441 504 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 TMEM204Q9BSN7 226 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 TM2D1Q9BX74 207 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 TGIF2-C20orf24A0A0A6YYL0 155 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 IGKV1-9A0A0C4DH69 117 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 LOC390937A0A1W2PQ73 354 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 B4E171 279 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 TSPAN7P41732 249 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 TIMP4Q99727 224 aa14.32□□□□□ -0.12
SCARB2-210ENST00000638567 SRSF3P84103 164 aaKnown RBP14.31□□□□□ -0.12
SCARB2-210ENST00000638567 ZNF826PQ6ZT77 177 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 GLRX5Q86SX6 157 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 CCL17Q92583 94 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 TAF15Q92804 592 aaKnown RBP eCLIP14.31□□□□□ -0.12
SCARB2-210ENST00000638567 TMEM54Q969K7 222 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 IER2Q9BTL4 223 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 CAMPP49913 170 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 HNRNPA3P51991 378 aaKnown RBP14.31□□□□□ -0.12
SCARB2-210ENST00000638567 UBE2L3P68036 154 aaKnown RBP14.31□□□□□ -0.12
SCARB2-210ENST00000638567 MOB3BQ86TA1 216 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 MKRN2OSH3BPM6 223 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 LTBRP36941 435 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 RPEL1Q2QD12 228 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 LRRC10Q5BKY1 277 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 FAM209BQ5JX69 171 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 GALNT14Q96FL9 552 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 HES7Q9BYE0 225 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 GLRX2Q9NS18 164 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 hADV38S2A0JD32 116 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 HBZP02008 142 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 BIVMQ86UB2 503 aa14.31□□□□□ -0.12
SCARB2-210ENST00000638567 SGMS2Q8NHU3 365 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms