RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 LIN54Q6MZP7 749 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 ACSM6Q6P461 480 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 TRAT1Q6PIZ9 186 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 GLIPR1L1Q6UWM5 242 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 ZNF833PQ6ZTB9 187 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 LYPD6Q86Y78 171 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 GHSRQ92847 366 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 MUL1Q969V5 352 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 RDH12Q96NR8 316 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 CITED4Q96RK1 184 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 SLC29A1Q99808 456 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 ZNF251Q9BRH9 671 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 BABAM2Q9NXR7 383 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 JPT1Q9UK76 154 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 MRPS28Q9Y2Q9 187 aaKnown RBP9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 PEX16Q9Y5Y5 336 aa9.36□□□□□ -0.91
CACNA1A-250ENST00000637809 IGHV4OR15-8A0A075B7B6 117 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 A0A087WW49 117 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 TRBV5-7A0A0A0MS05 114 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 LINC01619G3V211 115 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 EGR2P11161 476 aaPredicted RBP9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 FSTP19883 344 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 OR3A3P47888 321 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 HTD2P86397 168 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 C6orf141Q5SZD1 244 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 ZNF554Q86TJ5 538 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 MRPL30Q8TCC3 161 aaKnown RBP9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 CASTOR1Q8WTX7 329 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 ARPC1AQ92747 370 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 PGLYRP3Q96LB9 341 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 Q96M66 194 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 TM2D3Q9BRN9 247 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 BANF2Q9H503 90 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 CHCHD3Q9NX63 227 aaKnown RBP9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 CLEC2DQ9UHP7 191 aa9.35□□□□□ -0.91
CACNA1A-250ENST00000637809 SORL1Q92673 2214 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 SAA2-SAA4A0A096LPE2 208 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 A0A1W2PN81 502 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 UBE2QL1A1L167 161 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 FAM90A7PA6NKC0 464 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 FAM90A23PA8MXZ1 464 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 YPEL1O60688 119 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 GLAP06280 429 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 LGALS1P09382 135 aaKnown RBP9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 SAA2P0DJI9 122 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 FUT3P21217 361 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 DCKP27707 260 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 CHRNA7P36544 502 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 CX3CL1P78423 397 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 ECSCRQ19T08 205 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 Q499Y3 187 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 LY6G6FQ5SQ64 297 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 ZNF660Q6AZW8 331 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 ZFP1Q6P2D0 407 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 TMPRSS11AQ6ZMR5 421 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 Q8N1Y9 231 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 ZNF485Q8NCK3 441 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 OR6Q1Q8NGQ2 317 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 YPEL2Q96QA6 119 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 SELENOIQ9C0D9 397 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 IFI27L2Q9H2X8 130 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 ZMAT4Q9H898 229 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 EDA2RQ9HAV5 297 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 FOXA2Q9Y261 457 aaPredicted RBP9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 NUBP2Q9Y5Y2 271 aa9.34□□□□□ -0.91
CACNA1A-250ENST00000637809 A0A1W2PPK0 400 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 FCN1O00602 326 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 MAS1P04201 325 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 OR8U9P0C7N5 309 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 IGHV4-30-4P0DP06 118 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 MGMTP16455 207 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 YIF1BQ5BJH7 314 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 AWAT2Q6E213 333 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 ZFAND6Q6FIF0 208 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 CDH26Q8IXH8 852 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 JAGN1Q8N5M9 183 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 ZFP41Q8N8Y5 198 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 OR14A2Q96R54 314 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 C9orf16Q9BUW7 83 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 CST11Q9H112 138 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 GHITMQ9H3K2 345 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 PALMDQ9NP74 551 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 C19orf73Q9NVV2 129 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 CKLFQ9UBR5 152 aa9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 DIMT1Q9UNQ2 313 aaKnown RBP9.33□□□□□ -0.92
CACNA1A-250ENST00000637809 RRHO14718 337 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 PDCD6O75340 191 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 CRTAPO75718 401 aaPredicted RBP9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 HSPB1P04792 205 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 SNRPBP14678 240 aaKnown RBP9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 HMGN3Q15651 99 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 LRRC36Q1X8D7 754 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 FAM71F2Q6NXP2 309 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 CD200R1LQ6Q8B3 271 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 FAM131AQ6UXB0 335 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 HAPLN4Q86UW8 402 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 TCTEX1D1Q8N7M0 179 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 FBXL15Q9H469 300 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 KCNIP1Q9NZI2 227 aa9.32□□□□□ -0.92
CACNA1A-250ENST00000637809 KIAA1456Q9P272 454 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms