RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 MMGT1Q8N4V1 131 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 DEFB125Q8N687 156 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 FER1L6-AS1Q8NA97 138 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 OR4S1Q8NGB4 309 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 OR4K5Q8NGD3 323 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 OR10AD1Q8NGE0 317 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 OR51A4Q8NGJ6 313 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 OR2T6Q8NHC8 308 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 PP6455Q8WZ26 134 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 SLAMF6Q96DU3 332 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 ADAT3Q96EY9 351 aaPredicted RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 GALNT14Q96FL9 552 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 DERL3Q96Q80 235 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 ZNF471Q9BX82 626 aaPredicted RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 SAMD10Q9BYL1 202 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 REG4Q9BYZ8 158 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 ZBP1Q9H171 429 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 POMKQ9H5K3 350 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 MAP6D1Q9H9H5 199 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 ZNF331Q9NQX6 463 aaPredicted RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 SAR1AQ9NR31 198 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 OR5AC2Q9NZP5 309 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 TMEM216Q9P0N5 145 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 KLK11Q9UBX7 282 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 ZNF580Q9UK33 172 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 MED31Q9Y3C7 131 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 PCYT1BQ9Y5K3 369 aaPredicted RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 OVOS2A0A0G2JMS6 1433 aa2.41□□□□□ -2.02
VIM-210ENST00000637053 NPHP4O75161 1426 aaPredicted RBP2.41□□□□□ -2.02
VIM-210ENST00000637053 PSME4Q14997 1843 aa2.4□□□□□ -2.02
VIM-210ENST00000637053 ADGRL2O95490 1459 aa2.4□□□□□ -2.02
VIM-210ENST00000637053 BCL9LQ86UU0 1499 aa2.4□□□□□ -2.02
VIM-210ENST00000637053 TMED7-TICAM2A0A0A6YYA0 188 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TRAV8-2A0A0B4J237 113 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TRAV5A0A0B4J249 113 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TMEM269A0A1B0GVZ9 245 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 A0A1B0GWB2 263 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 hDV102S1A0JD36 115 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 LINC01553A4QN01 128 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TMEM212A6NML5 194 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 RIIAD1A6NNX1 92 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 ZNF724A8MTY0 619 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 J3QR89 54 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 OVOL1O14753 267 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 ZNHIT1O43257 154 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 PROP1O75360 226 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 KCNK2O95069 426 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 NDUFB8O95169 186 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 NUDT14O95848 222 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 CXorf1O96002 111 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 GPX1P07203 203 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 SOD3P08294 240 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 FGF2P09038 288 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 LINC00694P0DN24 101 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 PRSS3P35030 304 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TAF6P49848 677 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 NDUFA6P56556 154 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 MTPNP58546 118 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 C1QTNF8P60827 252 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 SNRPD2P62316 118 aaKnown RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 RPS24P62847 133 aaKnown RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 FKBP3Q00688 224 aaKnown RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 MEF2BQ02080 365 aaPredicted RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 SLC38A11Q08AI6 406 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 LAMTOR4Q0VGL1 99 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 DAZ2Q13117 558 aaKnown RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 ENDOGQ14249 297 aaKnown RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 JOSD1Q15040 202 aaPredicted RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 GSG1Q2KHT4 349 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 C12orf74Q32Q52 190 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 NSUN5P1Q3KNT7 163 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 ZNF260Q3ZCT1 412 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 MIDNQ504T8 468 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 LRRC10Q5BKY1 277 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TTC32Q5I0X7 151 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TSPO2Q5TGU0 170 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 ZNF57Q68EA5 555 aaPredicted RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 MOB1BQ7L9L4 216 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TCF23Q7RTU1 214 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TMEM179BQ7Z7N9 219 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 DAZ4Q86SG3 579 aaKnown RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 GKN2Q86XP6 184 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 SGPP2Q8IWX5 399 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 ZNF664Q8N3J9 261 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 ANKRD29Q8N6D5 301 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 RBMXL3Q8N7X1 1067 aaKnown RBP2.4□□□□□ -2.03
VIM-210ENST00000637053 NUP35Q8NFH5 326 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 OR11G2Q8NGC1 345 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 OR51T1Q8NGJ9 327 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 OR8S1Q8NH09 359 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 OR4C3Q8NH37 302 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 ZNRF4Q8WWF5 429 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 S100ZQ8WXG8 99 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TMEM106AQ96A25 262 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 WBP1Q96G27 269 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 ST6GAL2Q96JF0 529 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 TEX37Q96LM6 180 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 C2orf48Q96LS8 159 aa2.4□□□□□ -2.03
VIM-210ENST00000637053 RDH12Q96NR8 316 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms