RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	OMG	P23515	440 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	PLA2G5	P39877	138 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	CR1L	Q2VPA4	569 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	FAM209A	Q5JX71	171 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	UTF1	Q5T230	341 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ALKAL2	Q6UX46	152 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	GALNT11	Q8NCW6	608 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	EGLN1	Q9GZT9	426 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	UBQLN2	Q9UHD9	624 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TMED3	Q9Y3Q3	217 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ACACB	O00763	2458 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ANKRD34B	A5PLL1	514 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TMEM178B	H3BS89	294 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SPINT2	O43291	252 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	MUC1	P15941	1255 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF16	P17020	682 aa	Predicted RBP	13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	EFNB3	Q15768	340 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	OR5D13	Q8NGL4	314 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LRRC46	Q96FV0	321 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	AKR1E2	Q96JD6	320 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TOLLIP	Q9H0E2	274 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	OR2D2	Q9H210	308 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF665	Q9H7R5	613 aa		13.18	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SPTBN1	Q01082	2364 aa	Known RBP	13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LRRC30	A6NM36	301 aa		13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZG16	O60844	167 aa		13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816	IGHV3-7	P01780	117 aa		13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816	GZMH	P20718	246 aa		13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SRPX	P78539	464 aa		13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816	NINJ1	Q92982	152 aa		13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ABHD14B	Q96IU4	210 aa		13.17	□□□□□ -0.3
CACNA1A-231	ENST00000636816		A0A0G2JRQ6	117 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	KANTR	A0A1W2PQU2	76 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816		B9A039	149 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816		K7EPK0	472 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ADAM20	O43506	726 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	BCL2L11	O43521	198 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	DEDD	O75618	318 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	FCN3	O75636	299 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	IGKV1-39	P01597	117 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	IGKV1D-39	P04432	117 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	CGB3	P0DN86	165 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	CGB7	P0DN87	165 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	S100G	P29377	79 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SWI5	Q1ZZU3	235 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	C17orf58	Q2M2W7	97 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SLC51B	Q86UW2	128 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	FAM71E2	Q8N5Q1	922 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF645	Q8N7E2	425 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	RBPMS	Q93062	196 aa	Known RBP	13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	C14orf79	Q96F83	325 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	MS4A5	Q9H3V2	200 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TMEM106B	Q9NUM4	274 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	USF3	Q68DE3	2245 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	YLPM1	P49750	1951 aa	Known RBP	13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LGALS8	O00214	317 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TMPRSS2	O15393	492 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ST8SIA5	O15466	376 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	RLN2	P04090	185 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LINC00205	P59089	165 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	RPL30	P62888	115 aa	Known RBP	13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	HTD2	P86397	168 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	IZUMO4	Q1ZYL8	232 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF672	Q499Z4	452 aa	Predicted RBP	13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF585B	Q52M93	769 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TRAT1	Q6PIZ9	186 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	BTNL3	Q6UXE8	466 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	TCF23	Q7RTU1	214 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	OR4D5	Q8NGN0	318 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	PSG11	Q9UQ72	335 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LRBA	P50851	2863 aa		13.16	□□□□□ -0.3
CACNA1A-231	ENST00000636816	SIGLEC5	O15389	551 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	HKR1	P10072	659 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LOXL3	P58215	753 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	NMS	Q5H8A3	153 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	LYPD2	Q6UXB3	125 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	MUC15	Q8N387	334 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ST8SIA2	Q92186	375 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	AGMAT	Q9BSE5	352 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	ZNF471	Q9BX82	626 aa	Predicted RBP	13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	CALY	Q9NYX4	217 aa		13.15	□□□□□ -0.3
CACNA1A-231	ENST00000636816	PPIAL4E	A0A075B759	164 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	PPIAL4D	F5H284	164 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	LYNX1	G3V0Z9	82 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	NXPH3	O95157	252 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	SERPINE2	P07093	398 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	PET100	P0DJ07	73 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	PPIAL4F	P0DN26	164 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	LYNX1	P0DP58	116 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	MORN2	Q502X0	79 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	CLEC9A	Q6UXN8	241 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	LEAP2	Q969E1	77 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	AQP10	Q96PS8	301 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	ARPC5L	Q9BPX5	153 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	TMEM204	Q9BSN7	226 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	OR6C3	Q9NZP0	311 aa		13.14	□□□□□ -0.31
CACNA1A-231	ENST00000636816	GNG12	Q9UBI6	72 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms