RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 OR52L2PQ8NGH6 319 aa12.44□□□□□ -0.42
LINC00339-209ENST00000635450 OR56B4Q8NH76 319 aa12.44□□□□□ -0.42
LINC00339-209ENST00000635450 WIPF2Q8TF74 440 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-209ENST00000635450 IL1F10Q8WWZ1 152 aa12.44□□□□□ -0.42
LINC00339-209ENST00000635450 HDHD3Q9BSH5 251 aaPredicted RBP12.44□□□□□ -0.42
LINC00339-209ENST00000635450 CENPOQ9BU64 300 aa12.44□□□□□ -0.42
LINC00339-209ENST00000635450 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
LINC00339-209ENST00000635450 RNF167Q9H6Y7 350 aa12.44□□□□□ -0.42
LINC00339-209ENST00000635450 C12orf4Q9NQ89 552 aa12.44□□□□□ -0.42
LINC00339-209ENST00000635450 A0A075B6Q4 140 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 A0A1W2PPI3 338 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 ADARB2-AS1A8MUL3 147 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 G3V4G9 280 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 SLC31A2O15432 143 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 TXNL1O43396 289 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 YPEL1O60688 119 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 OR2F2O95006 317 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 CD28P10747 220 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 REG1BP48304 166 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 BLCAPP62952 87 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 HLA-DRB3P79483 266 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 DIAPH2-AS1Q14236 149 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 ARL6IP1Q15041 203 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 MOGAT2Q3SYC2 334 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 RBM14Q96PK6 669 aaKnown RBP12.43□□□□□ -0.42
LINC00339-209ENST00000635450 YPEL2Q96QA6 119 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 ABHD14AQ9BUJ0 271 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 DNAH3Q8TD57 4116 aa12.43□□□□□ -0.42
LINC00339-209ENST00000635450 IGHV1-3A0A0C4DH29 117 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 FAM90A9PA6NNJ1 464 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 RAB27BO00194 218 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 PEX14O75381 377 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 SCGNO76038 276 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 SNRNP70P08621 437 aaKnown RBP12.42□□□□□ -0.42
LINC00339-209ENST00000635450 CLEC2LP0C7M8 214 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 TMEM11P17152 192 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 PPP1CCP36873 323 aaKnown RBP12.42□□□□□ -0.42
LINC00339-209ENST00000635450 ZNF134P52741 427 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 ARFRP1Q13795 201 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 GNMTQ14749 295 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 LY6G6FQ5SQ64 297 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 IDNKQ5T6J7 187 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 C5orf24Q7Z6I8 188 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 TGIF2LXQ8IUE1 241 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 OR2AK2Q8NG84 335 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 RTN4IP1Q8WWV3 396 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-209ENST00000635450 YIPF6Q96EC8 236 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 Q9N2K0 584 aa12.42□□□□□ -0.42
LINC00339-209ENST00000635450 TRIM64CA6NLI5 447 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 SERPINE3A8MV23 424 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 M0QZK8 103 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 HSPA12AO43301 675 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 IGKV1D-33P01593 117 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 IGKV1-33P01594 117 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 PRB2P02812 416 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-209ENST00000635450 SNRPBP14678 240 aaKnown RBP12.41□□□□□ -0.42
LINC00339-209ENST00000635450 HIST1H1DP16402 221 aaKnown RBP12.41□□□□□ -0.42
LINC00339-209ENST00000635450 GNB3P16520 340 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 ZNF137PP52743 207 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 SCAND1P57086 179 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 NSUN5P1Q3KNT7 163 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 CROCCP3Q8IVE0 287 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 LGALS14Q8TCE9 139 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 ST6GALNAC6Q969X2 333 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 PHF21AQ96BD5 680 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 MOB4Q9Y3A3 225 aa12.41□□□□□ -0.42
LINC00339-209ENST00000635450 SH2D7A6NKC9 451 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-209ENST00000635450 MFNGO00587 321 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 TMEM127O75204 238 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 FBXO24O75426 580 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 ZBTB25P24278 435 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 TALDO1P37837 337 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 VDAC2P45880 294 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-209ENST00000635450 HNF4GQ14541 408 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 BEAN1Q3B7T3 259 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 Q6ZPA2 131 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 EDARADDQ8WWZ3 215 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 CITED2Q99967 270 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-209ENST00000635450 WNT10AQ9GZT5 417 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 SLC23A1Q9UHI7 598 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 KCNK7Q9Y2U2 307 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 ETV7Q9Y603 341 aa12.4□□□□□ -0.42
LINC00339-209ENST00000635450 IGHV3-72A0A0B4J1Y9 119 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 TRDCB7Z8K6 153 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 LANCL1O43813 399 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 OPN1MWP04001 364 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 SCTP09683 121 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 OPN1MW2P0DN77 364 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 OPN1MW3P0DN78 364 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 CD1BP29016 333 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 CEACAM6P40199 344 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 LSM3P62310 102 aaKnown RBP12.39□□□□□ -0.43
LINC00339-209ENST00000635450 KIR2DS1Q14954 304 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 ABCA11PQ4W5N1 156 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 SAMD5Q5TGI4 173 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 OR2T10Q8NGZ9 312 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 RHBDL2Q9NX52 303 aa12.39□□□□□ -0.43
LINC00339-209ENST00000635450 PIPOXQ9P0Z9 390 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms