RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 GNMTQ14749 295 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 MMDQ15546 238 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 HMGN3Q15651 99 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 DEFB136Q30KP8 78 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 RNLSQ5VYX0 342 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 FAM71F2Q6NXP2 309 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 ZNF833PQ6ZTB9 187 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 OR52L2PQ8NGH6 319 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 WWC2-AS2Q96NR7 200 aa9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 LSM4Q9Y4Z0 139 aaKnown RBP9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 DYNC2H1Q8NCM8 4307 aaKnown RBP9.73□□□□□ -0.85
SOX2-OT-247ENST00000628347 GNAO1P09471 354 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 NHLRC4P0CG21 123 aaPredicted RBP9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 CD37P11049 281 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 PPP1CCP36873 323 aaKnown RBP9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 RAB25P57735 213 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 ACTBP60709 375 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 KIAA0141Q14154 515 aaPredicted RBP9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 C1orf100Q5SVJ3 147 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 AHSA2Q719I0 299 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 MS4A15Q8N5U1 240 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 NPBQ8NG41 125 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 PHYHIPQ92561 330 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 GALMQ96C23 342 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 CYYR1Q96J86 154 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 UBE2E2Q96LR5 201 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 MRPL20Q9BYC9 149 aaKnown RBP9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 OR51J1Q9H342 316 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 ERGIC3Q9Y282 383 aa9.72□□□□□ -0.85
SOX2-OT-247ENST00000628347 IGHV7-81A0A0B4J1V7 117 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 SEC14L6B5MCN3 397 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 I3L521 148 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 CASQ2O14958 399 aaPredicted RBP9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 NBR2O15453 112 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 NDUFA3O95167 84 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 IGLV1-40P01703 118 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 VSIG8P0DPA2 414 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 SLC2A2P11168 524 aaPredicted RBP9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 MYF6P23409 242 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 LUMP51884 338 aaPredicted RBP9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 CRIP2P52943 208 aaPredicted RBP9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 RPS27AP62979 156 aaKnown RBP9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 RCN1Q15293 331 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 C5orf64Q2M2E5 130 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 ACSM3Q53FZ2 586 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 OGFRL1Q5TC84 451 aaPredicted RBP9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 GLT8D1Q68CQ7 371 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 ZNF880Q6PDB4 577 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 C5orf24Q7Z6I8 188 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 LRRTM1Q86UE6 522 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 ZNF491Q8N8L2 437 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 BPIFB6Q8NFQ5 453 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 FAM46BQ96A09 425 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 RBMXL1Q96E39 390 aaKnown RBP9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 NEDD4LQ96PU5 975 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 SULT4A1Q9BR01 284 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 ZNF251Q9BRH9 671 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 TM2D1Q9BX74 207 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 SCOCQ9UIL1 159 aa9.71□□□□□ -0.86
SOX2-OT-247ENST00000628347 SAA2-SAA4A0A096LPE2 208 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 ITGB1BP1O14713 200 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 ATP6V0E1O15342 81 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 NAPSAO96009 420 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 CDK1P06493 297 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 SAA2P0DJI9 122 aaPredicted RBP9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 CNTFRP26992 372 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 INSL3P51460 131 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 NKAPLQ5M9Q1 402 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 DMRTA1Q5VZB9 504 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 SVOPQ8N4V2 548 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 MINDY2Q8NBR6 621 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR2AK2Q8NG84 335 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR11H1Q8NG94 326 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 KCNG3Q8TAE7 436 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 RITA1Q96K30 269 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 MND1Q9BWT6 205 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 TMEM59Q9BXS4 323 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 ANKRD60Q9BZ19 345 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 IFI27L2Q9H2X8 130 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 PIPOXQ9P0Z9 390 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 ABRACLQ9P1F3 81 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 VSIG4Q9Y279 399 aa9.7□□□□□ -0.86
SOX2-OT-247ENST00000628347 TRBV6-6A0A0A6YYG2 114 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 TRAV41A0A0B4J266 112 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 TMEM14DPA8MWL7 114 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 G3V318 75 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 SLC22A1O15245 554 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR8U8P0C7N1 319 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR3A3P47888 321 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 QRFPP83859 136 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 GABPB1Q06547 395 aaPredicted RBP9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 UNC119Q13432 240 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 INSL4Q14641 139 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 C19orf54Q5BKX5 351 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 FAM27D1Q5T7N8 215 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 ASPHD1Q5U4P2 390 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 OR10K2Q6IF99 312 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 LIN54Q6MZP7 749 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 TMEM65Q6PI78 240 aa9.69□□□□□ -0.86
SOX2-OT-247ENST00000628347 MOB1BQ7L9L4 216 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms