RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 LINC00052Q96N35 136 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 GCM1Q9NP62 436 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 TRGV8A0A0C4DH27 118 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 CLEC18AA5D8T8 446 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 A8MXK9 166 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 FGF16O43320 207 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 GPR137BO60478 399 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 FGF2P09038 288 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 EPHA1P21709 976 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 P2RY1P47900 373 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 NHLH2Q02577 135 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 FAM90A1Q86YD7 464 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 TGIF2LYQ8IUE0 185 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 CLEC18CQ8NCF0 446 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 GPR146Q96CH1 333 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 OR2D2Q9H210 308 aa16.4■□□□□ 0.22
CHRNA4-209ENST00000627000 CYB5R3P00387 301 aaPredicted RBP16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 WNT2P09544 360 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 SELLP14151 372 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 GATA4P43694 442 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 BTN1A1Q13410 526 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 ZNF585BQ52M93 769 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 OR1S2Q8NGQ3 325 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 LURAP1Q96LR2 239 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 WFIKKN1Q96NZ8 548 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 WFDC1Q9HC57 220 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 IL19Q9UHD0 177 aa16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 SMG1Q96Q15 3661 aaKnown RBP16.39■□□□□ 0.21
CHRNA4-209ENST00000627000 FAM24AA6NFZ4 105 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 C15orf65H3BRN8 121 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 SSSCA1O60232 199 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 FAM157CP0CG43 387 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 ADIPOQQ15848 244 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 LTC4SQ16873 150 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 ADAM5Q6NVV9 412 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 ZNF808Q8N4W9 903 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 EIF4E3Q8N5X7 224 aaKnown RBP16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 SNX22Q96L94 193 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 DEFB108AA8MXU0 73 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 TOR1AO14656 332 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 DUX4L9Q6RFH8 374 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 Q6ZRM9 215 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 ZCCHC24Q8N2G6 241 aaKnown RBP16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 ZNF645Q8N7E2 425 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 VKORC1Q9BQB6 163 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 DCAF16Q9NXF7 216 aa16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 RAI1Q7Z5J4 1906 aaPredicted RBP16.38■□□□□ 0.21
CHRNA4-209ENST00000627000 ODAMA1E959 279 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 OR4A8P0C604 315 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 ASCL1P50553 236 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 ID3Q02535 119 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 PAX5Q02548 391 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 GPR157Q5UAW9 335 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 NINJ1Q92982 152 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 TOLLIPQ9H0E2 274 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 PLA2G2EQ9NZK7 142 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 RNF7Q9UBF6 113 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 DIDO1Q9BTC0 2240 aaKnown RBP16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 DYSFO75923 2080 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 ADGRG4Q8IZF6 3080 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 MGST3O14880 152 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 FBXO24O75426 580 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 TUSC1Q2TAM9 212 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 DEFB108BQ8NET1 73 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 RNF141Q8WVD5 230 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 PLEKHF2Q9H8W4 249 aa16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 LIN7CQ9NUP9 197 aaKnown RBP16.37■□□□□ 0.21
CHRNA4-209ENST00000627000 ROS1P08922 2347 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 K7N7A8 449 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 TMEM50AO95807 157 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 IGKV1-5P01602 117 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 GAPDHP04406 335 aaKnown RBP16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 RPL30P62888 115 aaKnown RBP16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 EWSR1Q01844 656 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 ZNF273Q14593 569 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 OR2C3Q8N628 320 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 RNASE11Q8TAA1 199 aaKnown RBP16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 PLPPR2Q96GM1 343 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 IGSF23A1L1A6 192 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 PITX3O75364 302 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 JTBO76095 146 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 CAV2P51636 162 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 EDDM3BP56851 147 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 EIF5AP63241 154 aaKnown RBP16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 CCL8P80075 99 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 OR2B11Q5JQS5 317 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 ABHD14BQ96IU4 210 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 SEBOXQ9HB31 216 aaPredicted RBP16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 TAS2R3Q9NYW6 316 aa16.36■□□□□ 0.21
CHRNA4-209ENST00000627000 SPINT2O43291 252 aa16.35■□□□□ 0.21
CHRNA4-209ENST00000627000 TNFSF4P23510 183 aa16.35■□□□□ 0.21
CHRNA4-209ENST00000627000 EIF4EBP1Q13541 118 aaPredicted RBP16.35■□□□□ 0.21
CHRNA4-209ENST00000627000 BTNL3Q6UXE8 466 aa16.35■□□□□ 0.21
CHRNA4-209ENST00000627000 PPP1R35Q8TAP8 253 aa16.35■□□□□ 0.21
CHRNA4-209ENST00000627000 FAM222BQ8WU58 562 aa16.35■□□□□ 0.21
CHRNA4-209ENST00000627000 ST8SIA5O15466 376 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 RAMP3O60896 148 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 AKR1C2P52895 323 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 ODF3L1Q8IXM7 274 aa16.34■□□□□ 0.21
CHRNA4-209ENST00000627000 CACNG5Q9UF02 275 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms