RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 A0A1W2PPV9 198 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 HOXB3P14651 431 aaPredicted RBP7.77□□□□□ -1.17
VCL-206ENST00000623461 RBM11P57052 281 aaKnown RBP7.77□□□□□ -1.17
VCL-206ENST00000623461 TMEM187Q14656 261 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 TTC32Q5I0X7 151 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 TNFSF14O43557 240 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 TM4SF4P48230 202 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 NMUP48645 174 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 CEBPDP49716 269 aaPredicted RBP7.77□□□□□ -1.17
VCL-206ENST00000623461 C10orf113Q5VZT2 155 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 OR8B3Q8NGG8 313 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 VSTM2AQ8TAG5 236 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 SSMEM1Q8WWF3 244 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 MISP3Q96FF7 219 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 SEBOXQ9HB31 216 aaPredicted RBP7.77□□□□□ -1.17
VCL-206ENST00000623461 CABIN1Q9Y6J0 2220 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A10PA6NDY2 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A18PA6NE21 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A16PA6NEW6 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A20PA6NIJ5 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A8PA6NJQ4 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A7PA6NKC0 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 ZNF785A8K8V0 405 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A22PA8MWA6 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A12PA8MX19 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A5PA8MXJ8 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A23PA8MXZ1 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A15PP0C7V4 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A13PP0C7W8 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A14PP0C7W9 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 FAM90A24PP0C7X0 464 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 CA6P23280 308 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 GPR3P46089 330 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 BRWD1Q9NSI6 2320 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 KLF7O75840 302 aaPredicted RBP7.77□□□□□ -1.17
VCL-206ENST00000623461 NFAM1Q8NET5 270 aaPredicted RBP7.77□□□□□ -1.17
VCL-206ENST00000623461 C2orf88Q9BSF0 95 aa7.77□□□□□ -1.17
VCL-206ENST00000623461 HEATR1Q9H583 2144 aaKnown RBP7.77□□□□□ -1.17
VCL-206ENST00000623461 AHCTF1Q8WYP5 2266 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 SHISA8B8ZZ34 492 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 CYR61O00622 381 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 RBP4P02753 201 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 ZXDAP98168 799 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 TMEM170AQ8WVE7 144 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 COLCA2A8K830 154 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 NDUFA2O43678 99 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 RPL7P18124 248 aaKnown RBP7.76□□□□□ -1.17
VCL-206ENST00000623461 PIGYQ3MUY2 71 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 ZDHHC16Q969W1 377 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 VCX2Q9H322 139 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 RBKSQ9H477 322 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 AP5S1Q9NUS5 200 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 PXMP4Q9Y6I8 212 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 MGAT2Q10469 447 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 FUT5Q11128 374 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 HEPN1Q6WQI6 88 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 CYP2G1PQ6ZSU1 146 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 OR52M1Q8NGK5 317 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 CDX2Q99626 313 aaPredicted RBP7.76□□□□□ -1.17
VCL-206ENST00000623461 HDHD3Q9BSH5 251 aaPredicted RBP7.76□□□□□ -1.17
VCL-206ENST00000623461 MMP17Q9ULZ9 603 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 METTL12A8MUP2 240 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 DXOO77932 396 aaKnown RBP7.76□□□□□ -1.17
VCL-206ENST00000623461 NPY1RP25929 384 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 RNPS1Q15287 305 aaKnown RBP7.76□□□□□ -1.17
VCL-206ENST00000623461 C2orf68Q2NKX9 166 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 FBLL1A6NHQ2 334 aaKnown RBP7.76□□□□□ -1.17
VCL-206ENST00000623461 POU2F2P09086 479 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 SAMD13Q5VXD3 122 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 SLC35E4Q6ICL7 350 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 BIVMQ86UB2 503 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 OR5A2Q8NGI9 324 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 TMEM70Q9BUB7 260 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 SMCHD1A6NHR9 2005 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 LINC00869P0C866 280 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 SRIP30626 198 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 RPL11P62913 178 aaKnown RBP7.76□□□□□ -1.17
VCL-206ENST00000623461 C8orf44Q96CB5 159 aa7.76□□□□□ -1.17
VCL-206ENST00000623461 LINC00696Q6ZRV3 163 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 ZAR1Q86SH2 424 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 LYG1Q8N1E2 194 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 LSM10Q969L4 123 aaKnown RBP7.75□□□□□ -1.17
VCL-206ENST00000623461 CXXC4Q9H2H0 198 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 SDF2L1Q9HCN8 221 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 SCN3AQ9NY46 2000 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 SMIM13P0DJ93 91 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 ACP1P24666 158 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 DUSP2Q05923 314 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 CXorf66Q5JRM2 361 aaPredicted RBP7.75□□□□□ -1.17
VCL-206ENST00000623461 PSMG4Q5JS54 123 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 OR1B1Q8NGR6 318 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 UBALD1Q8TB05 177 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 SPSB4Q96A44 273 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 LAMTOR2Q9Y2Q5 125 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 OR1K1Q8NGR3 316 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 RNF122Q9H9V4 155 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 TSC2P49815 1807 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 OR4C46A6NHA9 309 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 ORM2P19652 201 aa7.75□□□□□ -1.17
VCL-206ENST00000623461 GFERP55789 205 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms