RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 OR10J1P30954 320 aa12□□□□□ -0.49
LDB3-209ENST00000623056 NTF4P34130 210 aa12□□□□□ -0.49
LDB3-209ENST00000623056 RPL29P47914 159 aaKnown RBP12□□□□□ -0.49
LDB3-209ENST00000623056 FGF12P61328 243 aa12□□□□□ -0.49
LDB3-209ENST00000623056 SPANXN5Q5MJ07 72 aa12□□□□□ -0.49
LDB3-209ENST00000623056 ZNF324BQ6AW86 544 aaPredicted RBP12□□□□□ -0.49
LDB3-209ENST00000623056 LSM10Q969L4 123 aaKnown RBP12□□□□□ -0.49
LDB3-209ENST00000623056 OR2H1Q9GZK4 316 aa12□□□□□ -0.49
LDB3-209ENST00000623056 GOLT1BQ9Y3E0 138 aa12□□□□□ -0.49
LDB3-209ENST00000623056 OR2W1Q9Y3N9 320 aa12□□□□□ -0.49
LDB3-209ENST00000623056 COL6A3P12111 3177 aa12□□□□□ -0.49
LDB3-209ENST00000623056 A0A0J9YW62 118 aa12□□□□□ -0.49
LDB3-209ENST00000623056 A0A1B0GUS0 222 aa12□□□□□ -0.49
LDB3-209ENST00000623056 TP53I11O14683 189 aa12□□□□□ -0.49
LDB3-209ENST00000623056 IGKV1-5P01602 117 aa12□□□□□ -0.49
LDB3-209ENST00000623056 SLC38A11Q08AI6 406 aa12□□□□□ -0.49
LDB3-209ENST00000623056 ACSM6Q6P461 480 aa12□□□□□ -0.49
LDB3-209ENST00000623056 KCNIP4Q6PIL6 250 aa12□□□□□ -0.49
LDB3-209ENST00000623056 C20orf204Q6ZNR8 217 aa12□□□□□ -0.49
LDB3-209ENST00000623056 TMEM256Q8N2U0 113 aa12□□□□□ -0.49
LDB3-209ENST00000623056 ALKBH3Q96Q83 286 aaPredicted RBP12□□□□□ -0.49
LDB3-209ENST00000623056 FGF23Q9GZV9 251 aaPredicted RBP12□□□□□ -0.49
LDB3-209ENST00000623056 PIGBOS1A0A0B4J2F0 54 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 A6NNC1 897 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 LILRA1O75019 489 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 RPLP1P05386 114 aaKnown RBP11.99□□□□□ -0.49
LDB3-209ENST00000623056 IL3RAP26951 378 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 WNT5AP41221 380 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 RPL15P61313 204 aaKnown RBP11.99□□□□□ -0.49
LDB3-209ENST00000623056 OR10V1Q8NGI7 309 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 ERRFI1Q9UJM3 462 aaPredicted RBP11.99□□□□□ -0.49
LDB3-209ENST00000623056 TIMM9Q9Y5J7 89 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 ZNF407Q9C0G0 2248 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 M0QZK8 103 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 NUPR1O60356 82 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 ZIC3O60481 467 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 NPSP0C0P6 89 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 CHRNA7P36544 502 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 OR3A1P47881 315 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 LCN2P80188 198 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 PRDX4Q13162 271 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 FAM78BQ5VT40 261 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 ZNF705AQ6ZN79 300 aaPredicted RBP11.99□□□□□ -0.49
LDB3-209ENST00000623056 ZNF573Q86YE8 665 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 OR5T1Q8NG75 326 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 CLDN23Q96B33 292 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 MS4A10Q96PG2 267 aa11.99□□□□□ -0.49
LDB3-209ENST00000623056 ARHGAP21Q5T5U3 1957 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 CTXND1A0A1B0GTU2 59 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 ZNF705FA8MVS1 300 aaPredicted RBP11.98□□□□□ -0.49
LDB3-209ENST00000623056 VENTXO95231 258 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 HPRT1P00492 218 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 ZNF705DP0CH99 300 aaPredicted RBP11.98□□□□□ -0.49
LDB3-209ENST00000623056 ZNF705BP0CI00 300 aaPredicted RBP11.98□□□□□ -0.49
LDB3-209ENST00000623056 OR8G2PQ6IF36 304 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 TSTD1Q8NFU3 115 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 OR10J5Q8NHC4 309 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 CPT1CQ8TCG5 803 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 TBX15Q96SF7 602 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 MANBALQ9NQG1 85 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 CRIM1Q9NZV1 1036 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 TRAPPC1Q9Y5R8 145 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 KIAA1549Q9HCM3 1950 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 G3V3Y1 287 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 LIFP15018 202 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 GLB1P16278 677 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 GPM6AP51674 278 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 DEFB123Q8N688 67 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 SPSB4Q96A44 273 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 NEIL1Q96FI4 390 aaPredicted RBP11.98□□□□□ -0.49
LDB3-209ENST00000623056 MTCH1Q9NZJ7 389 aa11.98□□□□□ -0.49
LDB3-209ENST00000623056 A0A0U1RQK1 487 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 ZNF320A2RRD8 509 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 SCRG1O75711 98 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 WNT2P09544 360 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 DSCR4P56555 118 aaPredicted RBP11.97□□□□□ -0.49
LDB3-209ENST00000623056 NXPH1P58417 271 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 GAGE1Q13065 139 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 WDR74Q6RFH5 385 aaPredicted RBP11.97□□□□□ -0.49
LDB3-209ENST00000623056 SYT13Q7L8C5 426 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 ZDHHC23Q8IYP9 409 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 OR56B2PQ8NGI1 322 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 ZCCHC14Q8WYQ9 949 aaKnown RBP11.97□□□□□ -0.49
LDB3-209ENST00000623056 OR6C1Q96RD1 312 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 IMMP2LQ96T52 175 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 FOXB1Q99853 325 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 STRADBQ9C0K7 418 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 A0A1W2PR80 420 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 C1QTNF9BB2RNN3 333 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 PAGE4O60829 102 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 PDGFBP01127 241 aaPredicted RBP11.97□□□□□ -0.49
LDB3-209ENST00000623056 IGLV2-14P01704 120 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 CELA2AP08217 269 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 CCL3P10147 92 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 GCH1P30793 250 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 CST9LP1Q5W188 147 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 MRPL52Q86TS9 123 aaKnown RBP11.97□□□□□ -0.49
LDB3-209ENST00000623056 SAXO1Q8IYX7 474 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 OR10G9Q8NGN4 311 aa11.97□□□□□ -0.49
LDB3-209ENST00000623056 OR10G7Q8NGN6 311 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms