RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 UCP1P25874 307 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 OPCMLQ14982 345 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 TMEM65Q6PI78 240 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 FGFRL1Q8N441 504 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 TMEM56Q96MV1 263 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 TMED3Q9Y3Q3 217 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 TMEM56-RWDD3S4R434 201 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 RELNP78509 3460 aa17.8■□□□□ 0.44
SPAST-204ENST00000621856 DSCAML1Q8TD84 2053 aa17.79■□□□□ 0.44
SPAST-204ENST00000621856 SPTBN1Q01082 2364 aaKnown RBP17.79■□□□□ 0.44
SPAST-204ENST00000621856 B3GALNT1O75752 331 aa17.79■□□□□ 0.44
SPAST-204ENST00000621856 PRB1P04280 392 aa17.79■□□□□ 0.44
SPAST-204ENST00000621856 ZNF16P17020 682 aaPredicted RBP17.79■□□□□ 0.44
SPAST-204ENST00000621856 S100A10P60903 97 aa17.79■□□□□ 0.44
SPAST-204ENST00000621856 TMUB2Q71RG4 321 aa17.79■□□□□ 0.44
SPAST-204ENST00000621856 SELENOHQ8IZQ5 122 aaKnown RBP17.79■□□□□ 0.44
SPAST-204ENST00000621856 RAB1BQ9H0U4 201 aa17.79■□□□□ 0.44
SPAST-204ENST00000621856 B8ZZF3 427 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 LYNX1G3V0Z9 82 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 F2RL2O00254 374 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 LYNX1P0DP58 116 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 S100A11P31949 105 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 AP2S1P53680 142 aaPredicted RBP17.78■□□□□ 0.44
SPAST-204ENST00000621856 RAB32Q13637 225 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 ZBTB34Q8NCN2 500 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 EDARADDQ8WWZ3 215 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 DCUN1D4Q92564 292 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 ARL6Q9H0F7 186 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 TNFSF18Q9UNG2 199 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 PSG11Q9UQ72 335 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 KBTBD11-OT1A0A1B0GTJ5 212 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 RNF212BA8MTL3 300 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 NDUFB3O43676 98 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 CDS2O95674 445 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 SERPINE2P07093 398 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 PET100P0DJ07 73 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 CGB3P0DN86 165 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 CGB7P0DN87 165 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 OMGP23515 440 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 IL15RAQ13261 267 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 C17orf58Q2M2W7 97 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 LYPD2Q6UXB3 125 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 OR8H1Q8NGG4 311 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 LIN7CQ9NUP9 197 aaKnown RBP17.78■□□□□ 0.44
SPAST-204ENST00000621856 CLN8Q9UBY8 286 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 ABCA4P78363 2273 aa17.78■□□□□ 0.44
SPAST-204ENST00000621856 hADV38S2A0JD32 116 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 ZNF729A6NN14 1252 aaPredicted RBP17.77■□□□□ 0.44
SPAST-204ENST00000621856 ST8SIA5O15466 376 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 YPEL1O60688 119 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 SCGB1D2O95969 90 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 WNT2P09544 360 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 COL8A2P25067 703 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 MORN2Q502X0 79 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 LRRC10Q5BKY1 277 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 C11orf71Q6IPW1 123 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 FAM219AQ8IW50 185 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 RBPMSQ93062 196 aaKnown RBP17.77■□□□□ 0.44
SPAST-204ENST00000621856 BBC3Q96PG8 261 aaPredicted RBP17.77■□□□□ 0.44
SPAST-204ENST00000621856 YPEL2Q96QA6 119 aa17.77■□□□□ 0.44
SPAST-204ENST00000621856 DUXBA0A1W2PPF3 345 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 TNFRSF13BO14836 293 aaPredicted RBP17.76■□□□□ 0.43
SPAST-204ENST00000621856 NDUFA2O43678 99 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 SOD3P08294 240 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 PRSS54Q6PEW0 395 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 TCF23Q7RTU1 214 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 FOXRED2Q8IWF2 684 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 INO80EQ8NBZ0 244 aaPredicted RBP17.76■□□□□ 0.43
SPAST-204ENST00000621856 CORO2AQ92828 525 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 IL22RA2Q969J5 263 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 RNF126Q9BV68 326 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 HEXA-AS1Q9H8Q6 139 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 PLEKHF2Q9H8W4 249 aa17.76■□□□□ 0.43
SPAST-204ENST00000621856 A0A0D9SG52 128 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 H0YIZ8 118 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 LOXL3P58215 753 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 MSMO1Q15800 293 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 H1FXQ92522 213 aaKnown RBP17.75■□□□□ 0.43
SPAST-204ENST00000621856 ABHD14BQ96IU4 210 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 OR5AC2Q9NZP5 309 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 PIGBOS1A0A0B4J2F0 54 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 OR2F2O95006 317 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 RPL31P62899 125 aaKnown RBP17.75■□□□□ 0.43
SPAST-204ENST00000621856 MEF2CQ06413 473 aaPredicted RBP17.75■□□□□ 0.43
SPAST-204ENST00000621856 OR2F1Q13607 317 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 SMCO1Q147U7 214 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 ACOT7LQ6ZUV0 252 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 C5orf30Q96GV9 206 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 SPIN2AQ99865 258 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 SPIN2BQ9BPZ2 258 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 UBTD1Q9HAC8 227 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 GFOD1Q9NXC2 390 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 IDI2-AS1Q9NZ38 188 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 LSM5Q9Y4Y9 91 aaKnown RBP17.75■□□□□ 0.43
SPAST-204ENST00000621856 LINC00312Q9Y6C7 94 aa17.75■□□□□ 0.43
SPAST-204ENST00000621856 DVL1O14640 695 aa17.74■□□□□ 0.43
SPAST-204ENST00000621856 DANCRP0C864 163 aa17.74■□□□□ 0.43
SPAST-204ENST00000621856 IGFBP2P18065 325 aa17.74■□□□□ 0.43
SPAST-204ENST00000621856 CATR1Q13166 79 aa17.74■□□□□ 0.43
SPAST-204ENST00000621856 DTX2Q86UW9 622 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms