RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 PPT1P50897 306 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 SPRNQ5BIV9 151 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 FAM53AQ6NSI3 398 aaPredicted RBP17.89■□□□□ 0.45
LIME1-210ENST00000621325 OR1S2Q8NGQ3 325 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 NSG2Q9Y328 171 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 CACNA1DQ01668 2161 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 NBEAQ8NFP9 2946 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 NPIPB11E5RHQ5 1161 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 ST8SIA3O43173 380 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 FGF16O43320 207 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 ADAM20O43506 726 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 LMO1P25800 156 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 TDGF1P3P51864 188 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 HMGN3Q15651 99 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 DOLPP1Q86YN1 238 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 MUCL1Q96DR8 90 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 SSX3Q99909 188 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 ASF1BQ9NVP2 202 aa17.89■□□□□ 0.45
LIME1-210ENST00000621325 RCL1Q9Y2P8 373 aaKnown RBP17.89■□□□□ 0.45
LIME1-210ENST00000621325 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.88■□□□□ 0.45
LIME1-210ENST00000621325 FAM157CP0CG43 387 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 F2RP25116 425 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 A8MXE2 369 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 CRYAAP02489 173 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 CDPF1Q6NVV7 123 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 OR1L1Q8NH94 360 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 LRRC29Q8WV35 223 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 COQ2Q96H96 371 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 NEU1Q99519 415 aa17.88■□□□□ 0.45
LIME1-210ENST00000621325 H0Y980 276 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 TAAR5O14804 337 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 CEACAM6P40199 344 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 TBR1Q16650 682 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 TPRX1Q8N7U7 411 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 GGACTQ9BVM4 153 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 PLEKHA2Q9HB19 425 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 SH3BGRL2Q9UJC5 107 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 PPP1R3CQ9UQK1 317 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 TMEM30CPA0ZSE6 113 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 HEXAP06865 529 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 OR8U9P0C7N5 309 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 EGR1P18146 543 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 NMSQ5H8A3 153 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 CXorf66Q5JRM2 361 aaPredicted RBP17.87■□□□□ 0.45
LIME1-210ENST00000621325 OR8U1Q8NH10 309 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 LURAP1Q96LR2 239 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 POMT1Q9Y6A1 747 aa17.87■□□□□ 0.45
LIME1-210ENST00000621325 PCNX1Q96RV3 2341 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 PLCE1Q9P212 2302 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 A0A1B0GW55 424 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 COLCA2A8K830 154 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 C1orf196B1AJZ1 125 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 DUX4L2P0CJ85 424 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 DUX4L3P0CJ86 424 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 DUX4L4P0CJ87 422 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 DUX4L5P0CJ88 424 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 DUX4L6P0CJ89 424 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 DUX4L7P0CJ90 424 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 OR3A1P47881 315 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 NKX6-1P78426 367 aaPredicted RBP17.86■□□□□ 0.45
LIME1-210ENST00000621325 COL10A1Q03692 680 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 OR5D13Q8NGL4 314 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 MAGT1Q9H0U3 335 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 DUX4Q9UBX2 424 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 PTPRQQ9UMZ3 2332 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 A0A0G2JNJ9 132 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 C12orf77C9JDV5 145 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 NXPH3O95157 252 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 PSG2P11465 335 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 PRR30Q53SZ7 412 aaPredicted RBP17.86■□□□□ 0.45
LIME1-210ENST00000621325 C1orf174Q8IYL3 243 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 RNF141Q8WVD5 230 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 WFDC1Q9HC57 220 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 PLA2G2EQ9NZK7 142 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 Q9UFV3 132 aa17.86■□□□□ 0.45
LIME1-210ENST00000621325 RBM7Q9Y580 266 aaKnown RBP17.86■□□□□ 0.45
LIME1-210ENST00000621325 A0A0G2JRQ6 117 aa17.85■□□□□ 0.45
LIME1-210ENST00000621325 CCKARP32238 428 aa17.85■□□□□ 0.45
LIME1-210ENST00000621325 BLOC1S1P78537 153 aa17.85■□□□□ 0.45
LIME1-210ENST00000621325 NHLH2Q02577 135 aa17.85■□□□□ 0.45
LIME1-210ENST00000621325 CD177Q8N6Q3 437 aa17.85■□□□□ 0.45
LIME1-210ENST00000621325 METTL1Q9UBP6 276 aaKnown RBP17.85■□□□□ 0.45
LIME1-210ENST00000621325 KCNS2Q9ULS6 477 aa17.85■□□□□ 0.45
LIME1-210ENST00000621325 FBXO24O75426 580 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 IGHV3-13P01766 116 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 VDAC1P21796 283 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 NKX2-1P43699 371 aaPredicted RBP17.84■□□□□ 0.45
LIME1-210ENST00000621325 SMIM21Q3B7S5 101 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 UNQ6494/PRO21346Q6UXR6 183 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 TMEM171Q8WVE6 324 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 OR8U8P0C7N1 319 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 GLRXP35754 106 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 GABRA2P47869 451 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 GLIPR1P48060 266 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 ASCL1P50553 236 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 BPIFB3P59826 476 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 CLINT1Q14677 625 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 IZUMO4Q1ZYL8 232 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 PRR7Q8TB68 274 aa17.84■□□□□ 0.45
LIME1-210ENST00000621325 MRGPRDQ8TDS7 321 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 253.5 ms