RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 VSTM2AQ8TAG5 236 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 TSPAN32Q96QS1 320 aa13.22□□□□□ -0.29
COL5A1-208ENST00000618395 UBE2L6O14933 153 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 NT5CQ8TCD5 201 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 HYAL3O43820 417 aaPredicted RBP13.21□□□□□ -0.29
COL5A1-208ENST00000618395 C1QL1O75973 258 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 PPP1CCP36873 323 aaKnown RBP13.21□□□□□ -0.29
COL5A1-208ENST00000618395 NPEPL1Q8NDH3 523 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 AGBL5Q8NDL9 886 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 SNAI2O43623 268 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 TMPRSS3P57727 454 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 TMEM177Q53S58 311 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 ASAH2BP0C7U1 165 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 HBBP68871 147 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 ZNF117Q03924 483 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 PGLYRP3Q96LB9 341 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 DLX6P56179 175 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 ZNF774Q6NX45 483 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 OR1K1Q8NGR3 316 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 OR1N1Q8NGS0 311 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 PLSCR2Q9NRY7 297 aa13.21□□□□□ -0.29
COL5A1-208ENST00000618395 CCSMST1Q4G0I0 132 aa13.21□□□□□ -0.3
COL5A1-208ENST00000618395 INSM2Q96T92 566 aaPredicted RBP13.21□□□□□ -0.3
COL5A1-208ENST00000618395 HDGFL3Q9Y3E1 203 aa13.21□□□□□ -0.3
COL5A1-208ENST00000618395 VENTXO95231 258 aa13.21□□□□□ -0.3
COL5A1-208ENST00000618395 SSBP2P81877 361 aaPredicted RBP13.21□□□□□ -0.3
COL5A1-208ENST00000618395 TM4SF20Q53R12 229 aa13.21□□□□□ -0.3
COL5A1-208ENST00000618395 HOXC13P31276 330 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 INSM1Q01101 510 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-208ENST00000618395 CASP8AP2Q9UKL3 1982 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 FAM157BP0CG42 384 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 FUT5Q11128 374 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 MEIG1Q5JSS6 88 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 GAPTQ8N292 157 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 ZNF707Q96C28 371 aaPredicted RBP13.2□□□□□ -0.3
COL5A1-208ENST00000618395 A0A087WUJ7 227 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 PRDX2P32119 198 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 WNT5AP41221 380 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 A0A096LPE4 126 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 A0A1W2PPZ6 126 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 SCRG1O75711 98 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 TMEM186Q96B77 213 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 CACNG7P62955 275 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 COL14A1Q05707 1796 aaKnown RBP13.2□□□□□ -0.3
COL5A1-208ENST00000618395 hADV38S2A0JD32 116 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 TGFAP01135 160 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 EMDP50402 254 aa13.2□□□□□ -0.3
COL5A1-208ENST00000618395 SCD5Q86SK9 330 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 DAPP1Q9UN19 280 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 TRAV5A0A0B4J249 113 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 DEFB108AA8MXU0 73 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 RAB1BQ9H0U4 201 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 KLK8O60259 260 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 RAB9AP51151 201 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 RRADP55042 308 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 DMKNQ6E0U4 476 aaPredicted RBP13.19□□□□□ -0.3
COL5A1-208ENST00000618395 OR4D9Q8NGE8 314 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 RPS20P60866 119 aaKnown RBP13.19□□□□□ -0.3
COL5A1-208ENST00000618395 ABHD14BQ96IU4 210 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 ST20Q9HBF5 79 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 NPVFQ9HCQ7 196 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 CCL27Q9Y4X3 112 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 GNB2P62879 340 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 EFNB1P98172 346 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 ADAMTSL4Q6UY14 1074 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 FAM174AQ8TBP5 190 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 NHP2Q9NX24 153 aaKnown RBP13.19□□□□□ -0.3
COL5A1-208ENST00000618395 PLXNB1O43157 2135 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 TRAV21A0A0B4J279 112 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 VSIG10L2P0DP72 767 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 CDAP32320 146 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 CYB561P49447 251 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 DEFB108BQ8NET1 73 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 KCNE4Q8WWG9 221 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 PPP1R3EQ9H7J1 279 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 M0QZQ0 153 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 IGHV4-39P01824 125 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 MRAPQ8TCY5 172 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 NAT6Q93015 286 aa13.19□□□□□ -0.3
COL5A1-208ENST00000618395 LAMB2P55268 1798 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 ATP5LO75964 103 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 OR5AN1Q8NGI8 311 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 PXMP4Q9Y6I8 212 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 OGG1O15527 345 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 ARL14EPLP0DKL9 152 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 MMD2Q8IY49 270 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 WDYHV1Q96HA8 205 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 RUNX1Q01196 453 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 PAPPA-AS1Q5QFB9 102 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 ZNF788Q6ZQV5 615 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 SELENOHQ8IZQ5 122 aaKnown RBP13.18□□□□□ -0.3
COL5A1-208ENST00000618395 APCDD1LQ8NCL9 501 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 TNFRSF12AQ9NP84 129 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 FREM1Q5H8C1 2179 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 ISG15P05161 165 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 ZNF415Q09FC8 603 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 TMEM174Q8WUU8 243 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 GTF3AQ92664 365 aaKnown RBP13.18□□□□□ -0.3
COL5A1-208ENST00000618395 G6PC2Q9NQR9 355 aa13.18□□□□□ -0.3
COL5A1-208ENST00000618395 IL36RNQ9UBH0 155 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms