RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NBL1P41271 181 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 SPCS3P61009 180 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 SWI5Q1ZZU3 235 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 MST1LQ2TV78 715 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 Q6ZRG5 221 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 OR51M1Q9H341 326 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 PLEKHA2Q9HB19 425 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 TP53TG5Q9Y2B4 290 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 TAAR5O14804 337 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 UCP1P25874 307 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 S100GP29377 79 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 VAMP2P63027 116 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 RPP30P78346 268 aaKnown RBP10.44□□□□□ -0.74
CIITA-212ENST00000618207 COL10A1Q03692 680 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 P2RY6Q15077 328 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 ACP7Q6ZNF0 438 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 OR2C3Q8N628 320 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 TMEM56Q96MV1 263 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 POMT1Q9Y6A1 747 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 ABCA4P78363 2273 aa10.44□□□□□ -0.74
CIITA-212ENST00000618207 CHST1O43916 411 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 DSCAMO60469 2012 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 GPR137BO60478 399 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 TMEM50AO95807 157 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 PRH1P02810 166 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 SMIM6P0DI80 62 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 VDAC1P21796 283 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 EWSR1Q01844 656 aaKnown RBP eCLIP10.43□□□□□ -0.74
CIITA-212ENST00000618207 AKIRIN2Q53H80 203 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 IGFL3Q6UXB1 125 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 BTNL3Q6UXE8 466 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 C1orf162Q8NEQ5 155 aaPredicted RBP10.43□□□□□ -0.74
CIITA-212ENST00000618207 TSNAXQ99598 290 aaKnown RBP10.43□□□□□ -0.74
CIITA-212ENST00000618207 ZZEF1O43149 2961 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 IGSF23A1L1A6 192 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 C12orf77C9JDV5 145 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 IGLV2-14P01704 120 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 PPP1CCP36873 323 aaKnown RBP10.43□□□□□ -0.74
CIITA-212ENST00000618207 EIF5AP63241 154 aaKnown RBP10.43□□□□□ -0.74
CIITA-212ENST00000618207 SRPXP78539 464 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 SRSF7Q16629 238 aaKnown RBP eCLIP10.43□□□□□ -0.74
CIITA-212ENST00000618207 C1orf185Q5T7R7 199 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 ZNF880Q6PDB4 577 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 FAM180AQ6UWF9 173 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 Q6ZRM9 215 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 EIF4E3Q8N5X7 224 aaKnown RBP10.43□□□□□ -0.74
CIITA-212ENST00000618207 MUCL1Q96DR8 90 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 OR2D2Q9H210 308 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 BIN3Q9NQY0 253 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 KCNIP1Q9NZI2 227 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 TMEM210A6NLX4 147 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 MKRN2OSH3BPM6 223 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 IGLV1-44P01699 117 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 IGHV2-70P01814 119 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 CRYAAP02489 173 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 IAPPP10997 89 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 EGR1P18146 543 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 MDH2P40926 338 aaKnown RBP10.43□□□□□ -0.74
CIITA-212ENST00000618207 BLOC1S1P78537 153 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 HNF4GQ14541 408 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 GUCA2BQ16661 112 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 EIF5AL1Q6IS14 154 aaKnown RBP10.43□□□□□ -0.74
CIITA-212ENST00000618207 DMRTC2Q8IXT2 367 aaPredicted RBP10.43□□□□□ -0.74
CIITA-212ENST00000618207 GPR146Q96CH1 333 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 COQ2Q96H96 371 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 SCNM1Q9BWG6 230 aa10.43□□□□□ -0.74
CIITA-212ENST00000618207 TRBV6-6A0A0A6YYG2 114 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 IFNA4P05014 189 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 ADCYAP1P18509 176 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 RND3P61587 244 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 NMSQ5H8A3 153 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 KRBOX4Q5JUW0 171 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 DRAM1Q8N682 238 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 RBMXL1Q96E39 390 aaKnown RBP10.42□□□□□ -0.74
CIITA-212ENST00000618207 BOD1Q96IK1 185 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 SPIN2AQ99865 258 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 SPIN2BQ9BPZ2 258 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 CABLES2Q9BTV7 478 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 RHOFQ9HBH0 211 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 CACNG5Q9UF02 275 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 CHD8Q9HCK8 2581 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 NCOR2Q9Y618 2525 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 BORCS7-ASMTA0A0B4J1R7 106 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 TMEM30CPA0ZSE6 113 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 H0Y980 276 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 IGKV1-39P01597 117 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 HBZP02008 142 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 IGKV1D-39P04432 117 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 PVALBP20472 110 aaPredicted RBP10.42□□□□□ -0.74
CIITA-212ENST00000618207 CD80P33681 288 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 P2RY1P47900 373 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 ZNF816Q0VGE8 651 aaPredicted RBP10.42□□□□□ -0.74
CIITA-212ENST00000618207 TMEM88Q6PEY1 159 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 TMEM182Q6ZP80 229 aaPredicted RBP10.42□□□□□ -0.74
CIITA-212ENST00000618207 MOGAT3Q86VF5 341 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 ZNRF1Q8ND25 227 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 OR13A1Q8NGR1 328 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 OR5C1Q8NGR4 320 aa10.42□□□□□ -0.74
CIITA-212ENST00000618207 EDARADDQ8WWZ3 215 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms