RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 IGKV1-6A0A0C4DH72 117 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 C3orf85A0A1B0GTC6 90 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 DUXBA0A1W2PPF3 345 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 A0A1W2PPR1 153 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 HSD17B6O14756 317 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 ATG12O94817 140 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 PET100P0DJ07 73 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 RAB7AP51149 207 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 CATR1Q13166 79 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 WFDC11Q8NEX6 87 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 CORO2AQ92828 525 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 LIN7CQ9NUP9 197 aaKnown RBP13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 CALYQ9NYX4 217 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 MIOXQ9UGB7 285 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 LINC00312Q9Y6C7 94 aa13.94□□□□□ -0.18
TRAPPC3-210ENST00000617904 TRAV39A0A0B4J263 110 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 KBTBD11-OT1A0A1B0GTJ5 212 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 C13orf42A0A1B0GVH6 325 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 PHF1O43189 567 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 YPEL1O60688 119 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 ZNF205O95201 554 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 GNRHRP30968 328 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 GZMKP49863 264 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 CD300CQ08708 224 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 C11orf71Q6IPW1 123 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 LIAT1Q6ZQX7 453 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 TCTEX1D1Q8N7M0 179 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 BVESQ8NE79 360 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR1L1Q8NH94 360 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 YPEL2Q96QA6 119 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 SPIN2AQ99865 258 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 SPIN2BQ9BPZ2 258 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR1A1Q9P1Q5 309 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 CLN8Q9UBY8 286 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 LAMP3Q9UQV4 416 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 VPS13CQ709C8 3753 aa13.93□□□□□ -0.18
TRAPPC3-210ENST00000617904 TRBV23-1A0A0A0MS06 115 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR8U9P0C7N5 309 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 DANCRP0C864 163 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 DAOP14920 347 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 TMEM33P57088 247 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 TBC1D26Q86UD7 250 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 KRTAP1-3Q8IUG1 177 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 ZNF695Q8IW36 515 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 ZNF645Q8N7E2 425 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 FAM216BQ8N7L0 139 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 TPRX1Q8N7U7 411 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR8B3Q8NGG8 313 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR52M1Q8NGK5 317 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR8U1Q8NH10 309 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 THAP6Q8TBB0 222 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 H1FXQ92522 213 aaKnown RBP13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR8B2Q96RD0 313 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 CHODLQ9H9P2 273 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 CCL28Q9NRJ3 127 aa13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 MAP1AP78559 2803 aaPredicted RBP13.92□□□□□ -0.18
TRAPPC3-210ENST00000617904 hCG_1809904A0A1W2PP81 198 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 A0A1W2PPE2 198 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 A0A1W2PR64 198 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 A0A1W2PRV1 198 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 H0Y980 276 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 F2RL2O00254 374 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 ITGB1BP1O14713 200 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 TFF1P04155 84 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 SERPINE2P07093 398 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 WNT2P09544 360 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 NUP62P37198 522 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 RPL31P62899 125 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 SUPT4H1P63272 117 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 SRSF4Q08170 494 aaKnown RBP13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 SMCO1Q147U7 214 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 TMEM155Q4W5P6 130 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 ESCO2Q56NI9 601 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 LY6G6FQ5SQ64 297 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 ZNF818PQ6ZRF7 136 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 LRTM2Q8N967 370 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 DRAXINQ8NBI3 349 aaPredicted RBP13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 IL22RA2Q969J5 263 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 TMEM246Q9BRR3 403 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 NMES1Q9C002 83 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 TMED3Q9Y3Q3 217 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 DYSFO75923 2080 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 PRR14LQ5THK1 2151 aa13.91□□□□□ -0.18
TRAPPC3-210ENST00000617904 DBX1A6NMT0 343 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 C15orf65H3BRN8 121 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 PPIHO43447 177 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 RLN2P04090 185 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 SOD3P08294 240 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR5AC1P0C628 307 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 RPS2P15880 293 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 FLNAP21333 2647 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 SSTR5P35346 364 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 CHD3Q12873 2000 aaKnown RBP13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 OR52L2PQ8NGH6 319 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 NEIL1Q96FI4 390 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 C2orf50Q96LR7 162 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 SMR3AQ99954 134 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 TMEM222Q9H0R3 208 aa13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 BEX4Q9NWD9 120 aaPredicted RBP13.9□□□□□ -0.18
TRAPPC3-210ENST00000617904 IDI2-AS1Q9NZ38 188 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms