RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TSTD3H0UI37 97 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 ATP6V1G2O95670 118 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 GPNMBQ14956 572 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 PCLAFQ15004 111 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RAB6CQ53S08 254 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 BCDIN3DQ7Z5W3 292 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 PKIBQ9C010 78 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 WNT10AQ9GZT5 417 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 CD320Q9NPF0 282 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 CEACAM4O75871 244 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 ASAH2BP0C7U1 165 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 GBGT1Q8N5D6 347 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 ZFP62Q8NB50 900 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 OR51H1Q8NH63 302 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RXFP4Q8TDU9 374 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 USMG5Q96IX5 58 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 ZNF275Q9NSD4 429 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 hCG_2014768A0A024R1R8 64 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 GABRB1P18505 474 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 HTR6P50406 440 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 PLPPR5Q32ZL2 321 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 MITD1Q8WV92 249 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 SCARF2Q96GP6 870 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 GLIPR2Q9H4G4 154 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 NMNAT1Q9HAN9 279 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 RPLP1P05386 114 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 NDUFA6P56556 154 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 UFM1P61960 85 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 SELENOTP62341 195 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 SPANXN1Q5VSR9 72 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RHOUQ7L0Q8 258 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 C4orf36Q96KX1 117 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 TMEM38AQ9H6F2 299 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 GPR84Q9NQS5 396 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 RHCGQ9UBD6 479 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 IGKV3D-15A0A087WSY6 115 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 IGKV3-15P01624 115 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 LSM10Q969L4 123 aaKnown RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 TNFRSF18Q9Y5U5 241 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 A0A1W2PR48 441 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 NBR2O15453 112 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 NHLRC4P0CG21 123 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 CD81P60033 236 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 ZNF585BQ52M93 769 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 OTUD1Q5VV17 481 aaPredicted RBP2.87□□□□□ -1.95
LPP-220ENST00000617246 ZNF525Q8N782 197 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 FGFBP3Q8TAT2 258 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 MARC2Q969Z3 335 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 SEMA5BQ9P283 1151 aa2.87□□□□□ -1.95
LPP-220ENST00000617246 WNT1P04628 370 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 OR1B1Q8NGR6 318 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 C10orf82Q8WW14 230 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 IGLV3-25P01717 112 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 MEIG1Q5JSS6 88 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 TMEM215Q68D42 235 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 NDUFA11Q86Y39 141 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 MLXQ9UH92 298 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 DYSFO75923 2080 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 ZNF324O75467 553 aaPredicted RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 DYNLT3P51808 116 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 C10orf126Q8N4M7 172 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CRYGNQ8WXF5 182 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 GSX2Q9BZM3 304 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 HRH4Q9H3N8 390 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 HIGD1AQ9Y241 93 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 ZNF281Q9Y2X9 895 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 PHLDA3Q9Y5J5 127 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 FBLL1A6NHQ2 334 aaKnown RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 NDUFA4O00483 81 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 NUDT3O95989 172 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 ALKBH1Q13686 389 aaKnown RBP2.86□□□□□ -1.95
LPP-220ENST00000617246 CELF2-AS1Q8N7Q2 184 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 RAB40CQ96S21 281 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CLPSL1A2RUU4 121 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CSF2RBP32927 897 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 ZNF679Q8IYX0 411 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 FANCD2OSQ96PS1 177 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 LINC00312Q9Y6C7 94 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 FAM189A1O60320 539 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 DEDDO75618 318 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 TMEM249Q2WGJ8 235 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SIGLECL1Q8N7X8 197 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SDF2L1Q9HCN8 221 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SIGLEC7Q9Y286 467 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 LINC00587B1AMM8 73 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 OR3A1P47881 315 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 COTL1Q14019 142 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 GATA6Q92908 595 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 SH2D2AQ9NP31 389 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 TRAPPC2P0DI81 140 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 TRAPPC2BP0DI82 140 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CELP19835 753 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 HOGA1Q86XE5 327 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 OR51E1Q8TCB6 317 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 NTNG1Q9Y2I2 539 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 LOC100130705A0A1B0GUX0 176 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 E5RGE8 158 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 GLI4P10075 376 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 CD200R1LQ6Q8B3 271 aa2.86□□□□□ -1.95
LPP-220ENST00000617246 PHLDA1Q8WV24 401 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms