RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 MS4A18Q3C1V0 323 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 KHDC1LQ5JSQ8 128 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 TEX30Q5JUR7 227 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 OR1L8Q8NGR8 309 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 SMIM12Q96EX1 92 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 RBM14Q96PK6 669 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 MRPL37Q9BZE1 423 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 SH3BGRL3Q9H299 93 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 KLF7O75840 302 aaPredicted RBP9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 NGFRP08138 427 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 ZNF708P17019 499 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 EFNB1P98172 346 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 OR2M3Q8NG83 312 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 ABHD3Q8WU67 409 aa9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 RPP25Q9BUL9 199 aaKnown RBP9.26□□□□□ -0.93
CLTCL1-209ENST00000617103 LEPROTL1O95214 131 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 ERGP11308 486 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 WNT5AP41221 380 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 SSPNQ14714 243 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM92Q6UXU6 159 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 PAXXQ9BUH6 204 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 KCNMB2Q9Y691 235 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 IGKV1-8A0A0C4DH67 115 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 BMI1P35226 326 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 SMAD4Q13485 552 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 HIKESHIQ53FT3 197 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 NFAM1Q8NET5 270 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 OR52M1Q8NGK5 317 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 ALPK2Q86TB3 2170 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM265A0A087WTH1 108 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 MOSPD3O75425 235 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 KBTBD11O94819 623 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 HPRT1P00492 218 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 HOXB1P14653 301 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 FGF12P61328 243 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 RELBQ01201 579 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 TUSC5Q8IXB3 177 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 GRAMD2BQ96HH9 432 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 LHX9Q9NQ69 397 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 AMMECR1Q9Y4X0 333 aaPredicted RBP9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 C2CD4DB7Z1M9 353 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A26D6RGX4 464 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 H3BVH4 76 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 GNG7O60262 68 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 DLX1P56177 255 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 NXPH1P58417 271 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 CCL17Q92583 94 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 HARBI1Q96MB7 349 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 ZNF385AQ96PM9 386 aaKnown RBP9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 RASL11BQ9BPW5 248 aa9.25□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A10PA6NDY2 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A18PA6NE21 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A16PA6NEW6 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A20PA6NIJ5 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A8PA6NJQ4 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A7PA6NKC0 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A22PA8MWA6 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A12PA8MX19 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A5PA8MXJ8 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A23PA8MXZ1 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM250H0YL14 139 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A15PP0C7V4 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A13PP0C7W8 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A14PP0C7W9 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FAM90A24PP0C7X0 464 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 CEACAM3P40198 252 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 UQCRFS1P47985 274 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 TGIF1Q15583 401 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 DEFB109BQ30KR1 87 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 PQLC2Q6ZP29 291 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 GPR146Q96CH1 333 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 SNRNP40Q96DI7 357 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 NPTNQ9Y639 398 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 ASXL3Q9C0F0 2248 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 LMX1BO60663 402 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 SCTP09683 121 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 FOLR2P14207 255 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 ZNF506Q5JVG8 444 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 LINC01590Q5TEZ4 76 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 SFTPA1Q8IWL2 248 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 GBGT1Q8N5D6 347 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 ZNF721Q8TF20 911 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 QTRT1Q9BXR0 403 aaKnown RBP9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 PARLQ9H300 379 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 ONECUT1Q9UBC0 465 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 GOSR1O95249 250 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 IFI6P09912 130 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 OR10S1Q8NGN2 331 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 KCNK17Q96T54 332 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 RBKSQ9H477 322 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 CLEC5AQ9NY25 188 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 DLEC1Q9Y238 1755 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 CABIN1Q9Y6J0 2220 aa9.24□□□□□ -0.93
CLTCL1-209ENST00000617103 TRAV38-1A0A0B4J264 116 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM210A6NLX4 147 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 PGLYRP1O75594 196 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 MNX1P50219 401 aaPredicted RBP9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 SELENOHQ8IZQ5 122 aaKnown RBP9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 OR2Y1Q8NGV0 311 aa9.23□□□□□ -0.93
CLTCL1-209ENST00000617103 TMEM45BQ96B21 275 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms