RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 RHBDL1O75783 438 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ADRB1P08588 477 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 CSRP3P50461 194 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 PRSS54Q6PEW0 395 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 TEPPQ6URK8 271 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ACP7Q6ZNF0 438 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR8I2Q8N0Y5 310 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 PNKDQ8N490 385 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR5H6Q8NGV6 325 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 IL22RA2Q969J5 263 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 DUX5Q96PT3 197 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 NPAS1Q99742 590 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 IGKV1D-42A0A075B6H8 117 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNF705FA8MVS1 300 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 KIAA1324LA8MWY0 1029 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 NPIPB9F8W1W9 429 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNF705DP0CH99 300 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNF705BP0CI00 300 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 VSIG8P0DPA2 414 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 HLA-GP17693 338 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 MBNL2Q5VZF2 373 aaKnown RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 LCN15Q6UWW0 184 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 SSX7Q7RTT5 188 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 OR2C3Q8N628 320 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 NUP205Q92621 2012 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 MBD3L4A6NDZ8 208 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 MBD3L3A6NE82 208 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 MBD3L5A6NJ08 208 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZNF727A8MUV8 499 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ORM2P19652 201 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 PI3P19957 117 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 SNRPD3P62318 126 aaKnown RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 MBD3L2Q8NHZ7 208 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 WBP1Q96G27 269 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ZMIZ1Q9ULJ6 1067 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 IGSF23A1L1A6 192 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 CELA3AP09093 270 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 PLA2G5P39877 138 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 ARF6P62330 175 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 MYPOPQ86VE0 399 aaPredicted RBP8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 RXFP4Q8TDU9 374 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 SPRR3Q9UBC9 169 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 MMP24Q9Y5R2 645 aa8.35□□□□□ -1.07
TNFRSF9-204ENST00000615230 SOCS1O15524 211 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 MEOX2P50222 304 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 MS4A3Q96HJ5 214 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 TUBA4BQ9H853 241 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 KLK11Q9UBX7 282 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 CENPVL1A0A0U1RR11 272 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 HYPMO75409 117 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 SIX6O95475 246 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 GNG4P50150 75 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 FOXL2P58012 376 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 UBE2L3P68036 154 aaKnown RBP8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 IRF3Q14653 427 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 VAX1Q5SQQ9 334 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 PARD6AQ9NPB6 346 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 CCL28Q9NRJ3 127 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 OOSP1A8MZH6 123 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 B4DSR2 109 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 PAX5Q02548 391 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 C1orf100Q5SVJ3 147 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 SP5Q6BEB4 398 aaPredicted RBP8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 SLC24A4Q8NFF2 622 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 CTSBP07858 339 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 MVDP53602 400 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 ORAI1Q96D31 301 aa8.34□□□□□ -1.07
TNFRSF9-204ENST00000615230 ALKAL2Q6UX46 152 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 OR4X1Q8NH49 305 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 PPP1R1CQ8WVI7 109 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 TMEM190Q8WZ59 177 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 TVP23CQ96ET8 276 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 DLL3Q9NYJ7 618 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 F5H697 171 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 PTHLHP12272 177 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 LCN2P80188 198 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 ZNF146Q15072 292 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 USF2Q15853 346 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 OR10G4Q8NGN3 311 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 OR10G9Q8NGN4 311 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 OR10G7Q8NGN6 311 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 CABLES2Q9BTV7 478 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 RNF167Q9H6Y7 350 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 MRPL22Q9NWU5 206 aaKnown RBP8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 ANKRD36A6QL64 1941 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 PYCARD-AS1I3L0S3 204 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 SULT1A1P50225 295 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 LINC01356Q8N9X3 169 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 SMIM7Q9BQ49 75 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 C19orf24Q9BVV8 132 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 CD37P11049 281 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 LY6EQ16553 131 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 CLEC12BQ2HXU8 276 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 UBALD1Q8TB05 177 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 AQP3Q92482 292 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 SLC25A28Q96A46 364 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 RLFQ13129 1914 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 CDRT15L2A8MXV6 281 aa8.33□□□□□ -1.08
TNFRSF9-204ENST00000615230 PPP5D1E7EU14 171 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms