RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NFYAP23511 347 aaPredicted RBP11.99□□□□□ -0.49
CD48-203ENST00000613788 FCGR2CP31995 323 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 GNG10P50151 68 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 BPIFB3P59826 476 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 PRB3Q04118 309 aaPredicted RBP11.99□□□□□ -0.49
CD48-203ENST00000613788 KLRD1Q13241 179 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 KLF9Q13886 244 aaPredicted RBP11.99□□□□□ -0.49
CD48-203ENST00000613788 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 ARRDC1Q8N5I2 433 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 LINC00311Q8N616 119 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 BEND2Q8NDZ0 799 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 FAM216AQ8WUB2 273 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 TINAGL1Q9GZM7 467 aaPredicted RBP11.99□□□□□ -0.49
CD48-203ENST00000613788 ABCB10Q9NRK6 738 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 TMEM160Q9NX00 188 aa11.99□□□□□ -0.49
CD48-203ENST00000613788 TRAV40A0A0B4J280 105 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 CENPXA8MT69 81 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 DISC1C4P0D8 188 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 UPK1BO75841 260 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 ARG1P05089 322 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 HNF1AP20823 631 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 RAB7AP51149 207 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 LGALS4P56470 323 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 CT45A1Q5HYN5 189 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 UTF1Q5T230 341 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 ZNF626Q68DY1 528 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 FAM53AQ6NSI3 398 aaPredicted RBP11.98□□□□□ -0.49
CD48-203ENST00000613788 C1orf229Q6ZS94 237 aaPredicted RBP11.98□□□□□ -0.49
CD48-203ENST00000613788 SLC25A48Q6ZT89 311 aaKnown RBP11.98□□□□□ -0.49
CD48-203ENST00000613788 PDZD9Q8IXQ8 264 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 ZNF439Q8NDP4 499 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 OR4C16Q8NGL9 310 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 CT45A3Q8NHU0 189 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 CREB3L1Q96BA8 519 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 ABHD14AQ9BUJ0 271 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 C11orf54Q9H0W9 315 aaPredicted RBP11.98□□□□□ -0.49
CD48-203ENST00000613788 GHITMQ9H3K2 345 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 OR2W1Q9Y3N9 320 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 RBM7Q9Y580 266 aaKnown RBP11.98□□□□□ -0.49
CD48-203ENST00000613788 WNK2Q9Y3S1 2297 aa11.98□□□□□ -0.49
CD48-203ENST00000613788 IGHV1-69DA0A0B4J2H0 117 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 TUSC2O75896 110 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 IGLV1-47P01700 117 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 IGHV1-69P01742 117 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 AMY2AP04746 511 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 ZNF134P52741 427 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 MIDNQ504T8 468 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 FAM120AOSQ5T036 256 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 OR4D10Q8NGI6 311 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 OR10X1Q8NGY0 326 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 BORCS5Q969J3 196 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 C7orf50Q9BRJ6 194 aaKnown RBP11.97□□□□□ -0.49
CD48-203ENST00000613788 ZNF2Q9BSG1 426 aaPredicted RBP11.97□□□□□ -0.49
CD48-203ENST00000613788 MMP28Q9H239 520 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 HRASLSQ9HDD0 168 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 MCUBQ9NWR8 336 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 AMMECR1Q9Y4X0 333 aaPredicted RBP11.97□□□□□ -0.49
CD48-203ENST00000613788 CELSR1Q9NYQ6 3014 aa11.97□□□□□ -0.49
CD48-203ENST00000613788 LINC00854A0A1B0GVQ3 168 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 A0A1W2PPE3 182 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 NAP1L6A6NFF2 107 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 NPFFO15130 113 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 PPYP01298 95 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 OR8U9P0C7N5 309 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 AADACP22760 399 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 IL3RAP26951 378 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 HTR1DP28221 377 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 LUMP51884 338 aaPredicted RBP11.96□□□□□ -0.49
CD48-203ENST00000613788 HERV-K104P61576 105 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 HLA-DRB5Q30154 266 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 KLF17Q5JT82 389 aaPredicted RBP11.96□□□□□ -0.49
CD48-203ENST00000613788 ZNF660Q6AZW8 331 aaPredicted RBP11.96□□□□□ -0.49
CD48-203ENST00000613788 C16orf87Q6PH81 154 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 OR8U1Q8NH10 309 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 OR56B4Q8NH76 319 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 SLC6A7Q99884 636 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 PRRT1Q99946 306 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 SCP2D1Q9UJQ7 156 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 NUP50Q9UKX7 468 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 ZANQ9Y493 2812 aa11.96□□□□□ -0.49
CD48-203ENST00000613788 IGHV3OR16-10A0A075B7F0 116 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 A0A1W2PRD5 423 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 A0A1W2PRF3 423 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 A0A1W2PRM7 423 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 ODF3BA8MYP8 253 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 BUB1B-PAK6H3BSN5 160 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 SLC31A2O15432 143 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 SLC22A5O76082 557 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 IGHV4-38-2P0DP08 117 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 CEACAM3P40198 252 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 MINOS1Q5TGZ0 78 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 FAAP20Q6NZ36 180 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 OR4P4Q8NGL7 312 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 TERB2Q8NHR7 220 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 AGMATQ9BSE5 352 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 PARP12Q9H0J9 701 aaKnown RBP11.96□□□□□ -0.5
CD48-203ENST00000613788 PIPOXQ9P0Z9 390 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 ZNF221Q9UK13 617 aa11.96□□□□□ -0.5
CD48-203ENST00000613788 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.5
CD48-203ENST00000613788 MINOS1-NBL1R4GNA1 71 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms