RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 OR1P1Q8NH06 330 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 RTN4IP1Q8WWV3 396 aaPredicted RBP14.04□□□□□ -0.16
CNOT3-208ENST00000613073 TRIB1Q96RU8 372 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 TMEM208Q9BTX3 173 aa14.04□□□□□ -0.16
CNOT3-208ENST00000613073 A0A1B0GW64 132 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 CLDN34H7C241 214 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 M0R143 59 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 LILRA1O75019 489 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 DFFBO76075 338 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 WNT5AP41221 380 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 GPR157Q5UAW9 335 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 MDP1Q86V88 176 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 TMEM171Q8WVE6 324 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 PAX5Q02548 391 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 PMS2P11Q13670 270 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 IGFBP7Q16270 282 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 MRPL41Q8IXM3 137 aaKnown RBP14.03□□□□□ -0.16
CNOT3-208ENST00000613073 OR10J5Q8NHC4 309 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 HS3ST6Q96QI5 342 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 HIST1H2AAQ96QV6 131 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 ANXA10Q9UJ72 324 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 PRR14LQ5THK1 2151 aa14.03□□□□□ -0.16
CNOT3-208ENST00000613073 PTPRBP23467 1997 aa14.02□□□□□ -0.16
CNOT3-208ENST00000613073 C3orf80F5H4A9 247 aa14.02□□□□□ -0.16
CNOT3-208ENST00000613073 CTSDP07339 412 aaPredicted RBP14.02□□□□□ -0.16
CNOT3-208ENST00000613073 MPV17LQ2QL34 196 aa14.02□□□□□ -0.16
CNOT3-208ENST00000613073 RTL6Q6ICC9 239 aa14.02□□□□□ -0.16
CNOT3-208ENST00000613073 BTNL3Q6UXE8 466 aa14.02□□□□□ -0.16
CNOT3-208ENST00000613073 SLC35E3Q7Z769 313 aa14.02□□□□□ -0.16
CNOT3-208ENST00000613073 BCL2L2Q92843 193 aaPredicted RBP14.02□□□□□ -0.16
CNOT3-208ENST00000613073 OPN3Q9H1Y3 402 aaPredicted RBP14.02□□□□□ -0.16
CNOT3-208ENST00000613073 DCHS1Q96JQ0 3298 aa14.02□□□□□ -0.16
CNOT3-208ENST00000613073 IGSF23A1L1A6 192 aa14.02□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF732B4DXR9 585 aa14.02□□□□□ -0.17
CNOT3-208ENST00000613073 BCL3P20749 454 aa14.02□□□□□ -0.17
CNOT3-208ENST00000613073 TDGF1P3P51864 188 aa14.02□□□□□ -0.17
CNOT3-208ENST00000613073 GNMTQ14749 295 aa14.02□□□□□ -0.17
CNOT3-208ENST00000613073 MYPOPQ86VE0 399 aaPredicted RBP14.02□□□□□ -0.17
CNOT3-208ENST00000613073 ZDHHC23Q8IYP9 409 aa14.02□□□□□ -0.17
CNOT3-208ENST00000613073 CLDND2Q8NHS1 167 aa14.02□□□□□ -0.17
CNOT3-208ENST00000613073 ACTR3CQ9C0K3 210 aaPredicted RBP14.02□□□□□ -0.17
CNOT3-208ENST00000613073 SMDT1Q9H4I9 107 aa14.02□□□□□ -0.17
CNOT3-208ENST00000613073 CA11O75493 328 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 LYZL6O75951 148 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 CELA3BP08861 270 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 EPHA1P21709 976 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 RBM11P57052 281 aaKnown RBP14.01□□□□□ -0.17
CNOT3-208ENST00000613073 ERVS71-1P61550 626 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 TMEM187Q14656 261 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 PPA1Q15181 289 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 OR2C3Q8N628 320 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 PRSS33Q8NF86 280 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 OR5C1Q8NGR4 320 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 BOD1Q96IK1 185 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 TECTBQ96PL2 329 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF442Q9H7R0 627 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 IL36RNQ9UBH0 155 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 LAMP3Q9UQV4 416 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 CD300LBA8K4G0 201 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 HSPB1P04792 205 aaKnown RBP14.01□□□□□ -0.17
CNOT3-208ENST00000613073 PRSS8Q16651 343 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF66Q6ZN08 573 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 FAM185AQ8N0U4 392 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 CNEP1R1Q8N9A8 125 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 TMEM37Q8WXS4 190 aa14.01□□□□□ -0.17
CNOT3-208ENST00000613073 CHD3Q12873 2000 aaKnown RBP14.01□□□□□ -0.17
CNOT3-208ENST00000613073 HSPB6O14558 160 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 PHF1O43189 567 aaPredicted RBP14□□□□□ -0.17
CNOT3-208ENST00000613073 DLEU1O43261 78 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 SSSCA1O60232 199 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 SCGB1D1O95968 90 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 DUSP1P28562 367 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 DAZAP2Q15038 168 aaPredicted RBP14□□□□□ -0.17
CNOT3-208ENST00000613073 BATFQ16520 125 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF506Q5JVG8 444 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF705AQ6ZN79 300 aaPredicted RBP14□□□□□ -0.17
CNOT3-208ENST00000613073 CMTM1Q8IZ96 169 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 DTD1Q8TEA8 209 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 GMPPAQ96IJ6 420 aaPredicted RBP14□□□□□ -0.17
CNOT3-208ENST00000613073 SYT3Q9BQG1 590 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 NAA60Q9H7X0 242 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 IL36GQ9NZH8 169 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 ATMQ13315 3056 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 DMXL2Q8TDJ6 3036 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 RP1L1Q8IWN7 2480 aaPredicted RBP14□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF728P0DKX0 622 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 FGF8P55075 233 aaPredicted RBP14□□□□□ -0.17
CNOT3-208ENST00000613073 CEACAM21Q3KPI0 293 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 OR10A7Q8NGE5 316 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 RCC1LQ96I51 464 aaKnown RBP14□□□□□ -0.17
CNOT3-208ENST00000613073 ESPL1Q14674 2120 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 PDCD6O75340 191 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 CNOT4O95628 575 aaKnown RBP14□□□□□ -0.17
CNOT3-208ENST00000613073 ZNF266Q14584 549 aa14□□□□□ -0.17
CNOT3-208ENST00000613073 CACNA1GO43497 2377 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 A0A1B0GU03 582 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 IDH3GP51553 393 aaPredicted RBP13.99□□□□□ -0.17
CNOT3-208ENST00000613073 IL13RA2Q14627 380 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 HERPUD1Q15011 391 aa13.99□□□□□ -0.17
CNOT3-208ENST00000613073 Q6ZPA2 131 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms