RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 PTPRDP23468 1912 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 hADV38S2A0JD32 116 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 COX5BP10606 129 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 LGALS4P56470 323 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 B2MP61769 119 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 MRPS11P82912 194 aaKnown RBP9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 INO80CQ6PI98 192 aaPredicted RBP9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 SLC25A45Q8N413 288 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 OR1P1Q8NH06 330 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 AUP1Q9Y679 476 aa9.42□□□□□ -0.9
CDC42EP3-206ENST00000611976 NDUFB3O43676 98 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 SLC25A5P05141 298 aaKnown RBP9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 CD1BP29016 333 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 MPLP40238 635 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 UBE2L3P68036 154 aaKnown RBP9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 C1QL2Q7Z5L3 287 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 BIVMQ86UB2 503 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 WFDC8Q8IUA0 241 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 OR4P4Q8NGL7 312 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 PSMG3Q9BT73 122 aaPredicted RBP9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 WDR61Q9GZS3 305 aaKnown RBP9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 FSCN3Q9NQT6 498 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 CELA2AP08217 269 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 SPINK2P20155 84 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 RNF151Q2KHN1 245 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 HFEQ30201 348 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 TEPPQ6URK8 271 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF818PQ6ZRF7 136 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 MDP1Q86V88 176 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF645Q8N7E2 425 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 NFAM1Q8NET5 270 aaPredicted RBP9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 SLC25A40Q8TBP6 338 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 VWCEQ96DN2 955 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 NDFIP1Q9BT67 221 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 PRNDQ9UKY0 176 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 YTHDF2Q9Y5A9 579 aaKnown RBP9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 SCN2AQ99250 2005 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 LOC102723971A0A1B0GUV8 181 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 B4E171 279 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF253O75346 499 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 TSPAN7P41732 249 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF83P51522 516 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 PAFAH1B2P68402 229 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 PSG5Q15238 335 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 TIMD4Q96H15 378 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 GMPPAQ96IJ6 420 aaPredicted RBP9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 TP53RKQ96S44 253 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 ZNF355PQ9NSJ1 428 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 CASP8AP2Q9UKL3 1982 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 SRSF10O75494 262 aaKnown RBP9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 SLC25A53Q5H9E4 307 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 VSTM2AQ8TAG5 236 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 RAB24Q969Q5 203 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 WNT5BQ9H1J7 359 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 RNF24Q9Y225 148 aa9.41□□□□□ -0.9
CDC42EP3-206ENST00000611976 NPIPB7O75200 414 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 HPRT1P00492 218 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 IGLV3-19P01714 112 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 NAT2P11245 290 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 DEFB109BQ30KR1 87 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 LRP11Q86VZ4 500 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 SSMEM1Q8WWF3 244 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 GDF15Q99988 308 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 GGACTQ9BVM4 153 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 IL36GQ9NZH8 169 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 SERTM2A0A1B0GWG4 89 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 A0A1W2PN81 502 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 MEX3AA1L020 520 aaKnown RBP9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 ACAA1P09110 424 aaPredicted RBP9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 USF1P22415 310 aaPredicted RBP9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 ACSM6Q6P461 480 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 RBKSQ9H477 322 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 RPLP1P05386 114 aaKnown RBP9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 NPY1RP25929 384 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 DDTP30046 118 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 C3AR1Q16581 482 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 C19orf35Q6ZS72 473 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 SGMS2Q8NHU3 365 aa9.4□□□□□ -0.9
CDC42EP3-206ENST00000611976 IGSF23A1L1A6 192 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 HELTA6NFD8 242 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 SYNGR1O43759 233 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR2H2O95918 312 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 CCL1P22362 96 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 TNFAIP6P98066 277 aaPredicted RBP9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 FA2HQ7L5A8 372 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 SPSB2Q99619 263 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 SRXN1Q9BYN0 137 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 TTTY12Q9BZ98 90 aa9.4□□□□□ -0.91
CDC42EP3-206ENST00000611976 SEC16AO15027 2179 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 A0A087WWC5 75 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 HOXB1P14653 301 aaPredicted RBP9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 CHRNB4P30926 498 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 SPCS3P61009 180 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 AESQ08117 197 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 PCOLCEQ15113 449 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 ELOBQ15370 118 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 OR4C12Q96R67 309 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 VPS25Q9BRG1 176 aa9.39□□□□□ -0.91
CDC42EP3-206ENST00000611976 PLSCR2Q9NRY7 297 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms