RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 ZNF835Q9Y2P0 537 aa10.71□□□□□ -0.69
CDH1-212ENST00000611625 KIAA1324LA8MWY0 1029 aaPredicted RBP10.71□□□□□ -0.7
CDH1-212ENST00000611625 CYB5R3P00387 301 aaPredicted RBP10.71□□□□□ -0.7
CDH1-212ENST00000611625 VMA21Q3ZAQ7 101 aa10.71□□□□□ -0.7
CDH1-212ENST00000611625 INO80CQ6PI98 192 aaPredicted RBP10.71□□□□□ -0.7
CDH1-212ENST00000611625 RNF126Q9BV68 326 aa10.71□□□□□ -0.7
CDH1-212ENST00000611625 ZNF355PQ9NSJ1 428 aa10.71□□□□□ -0.7
CDH1-212ENST00000611625 DLL3Q9NYJ7 618 aa10.71□□□□□ -0.7
CDH1-212ENST00000611625 MDKP21741 143 aaPredicted RBP10.7□□□□□ -0.7
CDH1-212ENST00000611625 LTBRP36941 435 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 NFAM1Q8NET5 270 aaPredicted RBP10.7□□□□□ -0.7
CDH1-212ENST00000611625 MSL2Q9HCI7 577 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 AGFG2O95081 481 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 TNFAIP6P98066 277 aaPredicted RBP10.7□□□□□ -0.7
CDH1-212ENST00000611625 DMWDQ09019 674 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 FAM162BQ5T6X4 162 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 ZNF818PQ6ZRF7 136 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 SAXO1Q8IYX7 474 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 TIMP4Q99727 224 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 TRGC2P03986 189 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 HOXA6P31267 233 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 SCGB2A2Q13296 93 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 GABRA6Q16445 453 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 MARS2Q96GW9 593 aaKnown RBP10.7□□□□□ -0.7
CDH1-212ENST00000611625 NDUFB3O43676 98 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 OR2H2O95918 312 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 AARDQ4LEZ3 155 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 SLC25A53Q5H9E4 307 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 IL22RA2Q969J5 263 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 SMIM8Q96KF7 97 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 KLHDC3Q9BQ90 382 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 AKIRIN1Q9H9L7 192 aaPredicted RBP10.7□□□□□ -0.7
CDH1-212ENST00000611625 CACNA1DQ01668 2161 aa10.7□□□□□ -0.7
CDH1-212ENST00000611625 H0YIZ8 118 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 GYPAP02724 150 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 MPZP25189 248 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 OPRK1P41145 380 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 MEF2BQ02080 365 aaPredicted RBP10.69□□□□□ -0.7
CDH1-212ENST00000611625 KLHDC1Q8N7A1 406 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 ZNF441Q8N8Z8 693 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 GMPPAQ96IJ6 420 aaPredicted RBP10.69□□□□□ -0.7
CDH1-212ENST00000611625 hADV38S2A0JD32 116 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 MKRN2OSH3BPM6 223 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 PDE6DO43924 150 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 CLN5O75503 358 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 EIF3GO75821 320 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDH1-212ENST00000611625 CCKARP32238 428 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 LRRC10Q5BKY1 277 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 ACSM6Q6P461 480 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 C16orf82Q7Z2V1 217 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 SMIM15Q7Z3B0 74 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 FKBP11Q9NYL4 201 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 IL36GQ9NZH8 169 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 IGKV1-9A0A0C4DH69 117 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 PRR19A6NJB7 356 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 CRYABP02511 175 aaKnown RBP10.69□□□□□ -0.7
CDH1-212ENST00000611625 NAT2P11245 290 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 RPL29P47914 159 aaKnown RBP10.69□□□□□ -0.7
CDH1-212ENST00000611625 RPEL1Q2QD12 228 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 GINS3Q9BRX5 216 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 PKIBQ9C010 78 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 HIF1ANQ9NWT6 349 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 CRISP2P16562 243 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 CSN1S1P47710 185 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 B2MP61769 119 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 TPRX1Q8N7U7 411 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 OR10S1Q8NGN2 331 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 TAF15Q92804 592 aaKnown RBP eCLIP10.69□□□□□ -0.7
CDH1-212ENST00000611625 TMEM230Q96A57 120 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 OR4C12Q96R67 309 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 TMEM167BQ9NRX6 74 aa10.69□□□□□ -0.7
CDH1-212ENST00000611625 AURKAIP1Q9NWT8 199 aaPredicted RBP10.69□□□□□ -0.7
CDH1-212ENST00000611625 IGLV3-12A0A075B6K2 115 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 hCG_38984A0A1B0GV85 526 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 IZUMO4Q1ZYL8 232 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 SLC24A4Q8NFF2 622 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 OR1A1Q9P1Q5 309 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 COX5BP10606 129 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 BIVMQ86UB2 503 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 MOGAT3Q86VF5 341 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 OR52L2PQ8NGH6 319 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 OR4P4Q8NGL7 312 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 POM121Q96HA1 1249 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 PILRBQ9UKJ0 227 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 IGSF23A1L1A6 192 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 SYNGR3O43761 229 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 HBZP02008 142 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 SPEM2Q0P670 501 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 TIMD4Q96H15 378 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 CDX2Q99626 313 aaPredicted RBP10.68□□□□□ -0.7
CDH1-212ENST00000611625 GAL3ST2Q9H3Q3 398 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 ZNF319Q9P2F9 582 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 F8VVB4 439 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 F8VWA3 439 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 FGFRL1Q8N441 504 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 FADS6Q8N9I5 356 aa10.68□□□□□ -0.7
CDH1-212ENST00000611625 TECRQ9NZ01 308 aaKnown RBP10.68□□□□□ -0.7
CDH1-212ENST00000611625 NPY1RP25929 384 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 TGIF1Q15583 401 aa10.67□□□□□ -0.7
CDH1-212ENST00000611625 FAM166AQ6J272 317 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms