RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 DAPP1Q9UN19 280 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 TMEM250H0YL14 139 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 HRKO00198 91 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 IGLL1P15814 213 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 GNRHRP30968 328 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 THBS3P49746 956 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 CNN3Q15417 329 aaKnown RBP10.77□□□□□ -0.69
CTCFL-218ENST00000608440 PRTGQ2VWP7 1150 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 BRICD5Q6PL45 260 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 VN1R4Q7Z5H5 301 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 ATG4DQ86TL0 474 aaPredicted RBP10.77□□□□□ -0.69
CTCFL-218ENST00000608440 HDAC8Q9BY41 377 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 RARRES3Q9UL19 164 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 MMP17Q9ULZ9 603 aa10.77□□□□□ -0.69
CTCFL-218ENST00000608440 UBE2J1Q9Y385 318 aaPredicted RBP10.77□□□□□ -0.69
CTCFL-218ENST00000608440 SHANK1Q9Y566 2161 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 EDDM13A0A1B0GTR0 161 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 PAGE4O60829 102 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 CRYAAP02489 173 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 CELA3BP08861 270 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 STAG3L3P0CL85 134 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 HNRNPA2B1P22626 353 aaKnown RBP10.76□□□□□ -0.69
CTCFL-218ENST00000608440 OTX2P32243 289 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 IER3P46695 156 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 FUT6P51993 359 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 KIAA0895LQ68EN5 471 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 C20orf196Q8IYI0 205 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 SLC38A9Q8NBW4 561 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 SMRP1Q8NCR6 262 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 OR5P3Q8WZ94 311 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 KLHDC7BQ96G42 594 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 TM2D1Q9BX74 207 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 C3orf85A0A1B0GTC6 90 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 NPPCP23582 126 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 SEC13P55735 322 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 ZNF90Q03938 601 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 ZNF141Q15928 474 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 HIST3H3Q16695 136 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 HLA-DRB5Q30154 266 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 Q56UQ5 140 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 OR8I2Q8N0Y5 310 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 ZNF114Q8NC26 417 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 DDIT4LQ96D03 193 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 ZNF48Q96MX3 618 aaPredicted RBP10.76□□□□□ -0.69
CTCFL-218ENST00000608440 ATP6V0BQ99437 205 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 DERL1Q9BUN8 251 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 FAM206AQ9NX38 181 aa10.76□□□□□ -0.69
CTCFL-218ENST00000608440 A0A1W2PS18 150 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 GAGE10A6NGK3 116 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 ALG1L2C9J202 215 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 B3GALT2O43825 422 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 SPINK4O60575 86 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 IGKV1D-33P01593 117 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 IGKV1-33P01594 117 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 PRNPP04156 253 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 MSR1P21757 451 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 FOXL1Q12952 345 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 KRTCAP3Q53RY4 240 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 KLHL24Q6TFL4 600 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 RPP25LQ8N5L8 163 aaKnown RBP10.75□□□□□ -0.69
CTCFL-218ENST00000608440 PRO3102Q9H379 93 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 DECR2Q9NUI1 292 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 NECAP2Q9NVZ3 263 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 SMPXQ9UHP9 88 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 MUC22E2RYF6 1773 aaPredicted RBP10.75□□□□□ -0.69
CTCFL-218ENST00000608440 PPIAL4EA0A075B759 164 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 PPIAL4CA0A0B4J2A2 164 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 SNURFLB1AK76 121 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 PPIAL4DF5H284 164 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 PPIAL4FP0DN26 164 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 ANOS1P23352 680 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 GATA2P23769 480 aaPredicted RBP10.75□□□□□ -0.69
CTCFL-218ENST00000608440 PAX9P55771 341 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 RPL27P61353 136 aaKnown RBP10.75□□□□□ -0.69
CTCFL-218ENST00000608440 NRSN1Q8IZ57 195 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 RLN3Q8WXF3 142 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 BORCS7Q96B45 105 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 CHRDL1Q9BU40 450 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 APOOQ9BUR5 198 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 CLEC7AQ9BXN2 247 aa10.75□□□□□ -0.69
CTCFL-218ENST00000608440 ZNF816-ZNF321PA0A0X1KG74 233 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 BLACEA4D250 179 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 SPINT1O43278 529 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 HAND1O96004 215 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 IGLC1P0CG04 106 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 PNMTP11086 282 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 KITLGP21583 273 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 PEBP1P30086 187 aaKnown RBP10.74□□□□□ -0.69
CTCFL-218ENST00000608440 DEFB125Q8N687 156 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 CCDC3Q9BQI4 270 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 FNDC4Q9H6D8 234 aaPredicted RBP10.74□□□□□ -0.69
CTCFL-218ENST00000608440 MYO15AQ9UKN7 3530 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 KIAA1549LQ6ZVL6 1849 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 M0R1X1 148 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 CA2P00918 260 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 PHYHD1Q5SRE7 291 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 BVES-AS1Q5T3Y7 98 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 DNM1P34Q6PK57 102 aa10.74□□□□□ -0.69
CTCFL-218ENST00000608440 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.74□□□□□ -0.69
CTCFL-218ENST00000608440 UBALD2Q8IYN6 164 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms