RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 IL1F10Q8WWZ1 152 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 RSL24D1Q9UHA3 163 aaKnown RBP11.06□□□□□ -0.64
VRK3-219ENST00000600137 ANAPC10Q9UM13 185 aa11.06□□□□□ -0.64
VRK3-219ENST00000600137 STAB1Q9NY15 2570 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 A0A1W2PPI3 338 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 FAM90A9PA6NNJ1 464 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 H3BUX3 64 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 ITGB1BP1O14713 200 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 MNDAP41218 407 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 GNG2P59768 71 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 LRRC75BQ2VPJ9 315 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 C16orf87Q6PH81 154 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 HOGA1Q86XE5 327 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.05□□□□□ -0.64
VRK3-219ENST00000600137 CFHR4Q92496 578 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 AP3S1Q92572 193 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 TAF15Q92804 592 aaKnown RBP eCLIP11.05□□□□□ -0.64
VRK3-219ENST00000600137 GCDHQ92947 438 aaPredicted RBP11.05□□□□□ -0.64
VRK3-219ENST00000600137 CREB3L1Q96BA8 519 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 PHF21AQ96BD5 680 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 ZNF251Q9BRH9 671 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 ST6GALNAC5Q9BVH7 336 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 C11orf54Q9H0W9 315 aaPredicted RBP11.05□□□□□ -0.64
VRK3-219ENST00000600137 TNFRSF19Q9NS68 423 aa11.05□□□□□ -0.64
VRK3-219ENST00000600137 DNHD1Q96M86 4753 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 SMIM31A0A1B0GVY4 71 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 A6NDX4 124 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 OOSP1A8MZH6 123 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 TRIM77I1YAP6 450 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 DIRAS3O95661 229 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 SOX6P35712 828 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 TALDO1P37837 337 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 CEACAM6P40199 344 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 KIR2DS4P43632 304 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 MRPS15P82914 257 aaKnown RBP11.04□□□□□ -0.64
VRK3-219ENST00000600137 ZNF816Q0VGE8 651 aaPredicted RBP11.04□□□□□ -0.64
VRK3-219ENST00000600137 MADCAM1Q13477 382 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 HABP2Q14520 560 aaPredicted RBP11.04□□□□□ -0.64
VRK3-219ENST00000600137 KIR2DS1Q14954 304 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 PLA1AQ53H76 456 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 TMEM69Q5SWH9 247 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 LAX1Q8IWV1 398 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 OR5R1Q8NH85 324 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 GPX8Q8TED1 209 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 SNAPC3Q92966 411 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 DGCR14Q96DF8 476 aaKnown RBP11.04□□□□□ -0.64
VRK3-219ENST00000600137 SOSTQ9BQB4 213 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 IFI27L2Q9H2X8 130 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 DPAGT1Q9H3H5 408 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 SLC23A1Q9UHI7 598 aa11.04□□□□□ -0.64
VRK3-219ENST00000600137 FAM181BA6NEQ2 426 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 GPR137BO60478 399 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 NAT1P18440 290 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 ZBTB25P24278 435 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 CD24P25063 80 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 CEACAM3P40198 252 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 RELBQ01201 579 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 OR10X1Q8NGY0 326 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 RBMXL1Q96E39 390 aaKnown RBP11.03□□□□□ -0.64
VRK3-219ENST00000600137 ABHD1Q96SE0 405 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 ABHD14AQ9BUJ0 271 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 RDH8Q9NYR8 311 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 ANXA10Q9UJ72 324 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 VPREB3Q9UKI3 123 aa11.03□□□□□ -0.64
VRK3-219ENST00000600137 AMMECR1Q9Y4X0 333 aaPredicted RBP11.03□□□□□ -0.64
VRK3-219ENST00000600137 IGHV1-3A0A0C4DH29 117 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 MEIS3P1A6NDR6 274 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 CCDC160A6NGH7 325 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 A6NHS1 94 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 HSD17B6O14756 317 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 ST8SIA5O15466 376 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 CHST1O43916 411 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 NOL3O60936 208 aaKnown RBP11.02□□□□□ -0.65
VRK3-219ENST00000600137 RGS11O94810 467 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 TPPPO94811 219 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 PRSS3P35030 304 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 OR3A3P47888 321 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 EBI3Q14213 229 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 LY6EQ16553 131 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 CNIH2Q6PI25 160 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 LYSMD2Q8IV50 215 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 H1FOOQ8IZA3 346 aaPredicted RBP11.02□□□□□ -0.65
VRK3-219ENST00000600137 BEST4Q8NFU0 473 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 RTN4IP1Q8WWV3 396 aaPredicted RBP11.02□□□□□ -0.65
VRK3-219ENST00000600137 ABHD14BQ96IU4 210 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 DCUN1D5Q9BTE7 237 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 NDUFA13Q9P0J0 144 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 EXTL2Q9UBQ6 330 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 ADAM30Q9UKF2 790 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 TCF19Q9Y242 345 aa11.02□□□□□ -0.65
VRK3-219ENST00000600137 MRPS7Q9Y2R9 242 aaKnown RBP11.02□□□□□ -0.65
VRK3-219ENST00000600137 FAM25AB3EWG3 89 aa11.01□□□□□ -0.65
VRK3-219ENST00000600137 FAM25CB3EWG5 89 aa11.01□□□□□ -0.65
VRK3-219ENST00000600137 FAM25GB3EWG6 89 aa11.01□□□□□ -0.65
VRK3-219ENST00000600137 ZNF736B4DX44 427 aaPredicted RBP11.01□□□□□ -0.65
VRK3-219ENST00000600137 TIMM23O14925 209 aa11.01□□□□□ -0.65
VRK3-219ENST00000600137 BET1O15155 118 aa11.01□□□□□ -0.65
VRK3-219ENST00000600137 LANCL1O43813 399 aa11.01□□□□□ -0.65
VRK3-219ENST00000600137 TUSC2O75896 110 aa11.01□□□□□ -0.65
VRK3-219ENST00000600137 GAPDHP04406 335 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms