RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 OCEL1Q9H607 264 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 EHFQ9NZC4 300 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 TRBV6-7A0A0A0MS04 114 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 FPR2P25090 351 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 ASAH1Q13510 395 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 MEF2DQ14814 521 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 UTF1Q5T230 341 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 PRAMEF5Q5TYX0 476 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 GPR157Q5UAW9 335 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 OR56B4Q8NH76 319 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 OR10J5Q8NHC4 309 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 ZNF48Q96MX3 618 aaPredicted RBP12.22□□□□□ -0.45
TRIM28-207ENST00000597136 MS4A7Q9GZW8 240 aaPredicted RBP12.22□□□□□ -0.45
TRIM28-207ENST00000597136 METTL8Q9H825 291 aaKnown RBP12.22□□□□□ -0.45
TRIM28-207ENST00000597136 UNKLQ9H9P5 680 aaKnown RBP12.22□□□□□ -0.45
TRIM28-207ENST00000597136 OR2S2Q9NQN1 319 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 IDI2-AS1Q9NZ38 188 aa12.22□□□□□ -0.45
TRIM28-207ENST00000597136 IGHV1-69DA0A0B4J2H0 117 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 MDFIC2A0A1B0GVS7 189 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 LYRM1O43325 122 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 IGHV1-69P01742 117 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 RBP4P02753 201 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 AMY2AP04746 511 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 IFNA6P05013 189 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 ZNF735P0CB33 412 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 FAUP35544 74 aaKnown RBP12.21□□□□□ -0.46
TRIM28-207ENST00000597136 RIPPLY3P57055 190 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 LOXL3P58215 753 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 LTC4SQ16873 150 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 TUSC1Q2TAM9 212 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 TEX29Q8N6K0 151 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 OR10A7Q8NGE5 316 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 OR52L2PQ8NGH6 319 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 C7orf50Q9BRJ6 194 aaKnown RBP12.21□□□□□ -0.46
TRIM28-207ENST00000597136 C11orf54Q9H0W9 315 aaPredicted RBP12.21□□□□□ -0.46
TRIM28-207ENST00000597136 MCUBQ9NWR8 336 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 OR1A1Q9P1Q5 309 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 SLC23A1Q9UHI7 598 aa12.21□□□□□ -0.46
TRIM28-207ENST00000597136 IGHV3-43A0A0B4J1X8 118 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 CENPXA8MT69 81 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 HSPA12AO43301 675 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 IGHV1-8P0DP01 117 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 IGHV3-43DP0DP04 118 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 ZBTB25P24278 435 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 CEACAM6P40199 344 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 GNMTQ14749 295 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 ZNF660Q6AZW8 331 aaPredicted RBP12.2□□□□□ -0.46
TRIM28-207ENST00000597136 FAM53AQ6NSI3 398 aaPredicted RBP12.2□□□□□ -0.46
TRIM28-207ENST00000597136 DHRS11Q6UWP2 260 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 ARRDC1Q8N5I2 433 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 GINS4Q9BRT9 223 aa12.2□□□□□ -0.46
TRIM28-207ENST00000597136 hCG_1809904A0A1W2PP81 198 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 A0A1W2PPE2 198 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 A0A1W2PR64 198 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 A0A1W2PRV1 198 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 NAP1L6A6NFF2 107 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 DISC1C4P0D8 188 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 NFYAP23511 347 aaPredicted RBP12.19□□□□□ -0.46
TRIM28-207ENST00000597136 COX7A1P24310 79 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 NFYBP25208 207 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 FCGR2CP31995 323 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 PPP1CCP36873 323 aaKnown RBP12.19□□□□□ -0.46
TRIM28-207ENST00000597136 DEFA1P59665 94 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 DEFA3P59666 94 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 TSPAN5P62079 268 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 DEFB112Q30KQ8 113 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 TMEM30BQ3MIR4 351 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 H1FOOQ8IZA3 346 aaPredicted RBP12.19□□□□□ -0.46
TRIM28-207ENST00000597136 SIGLECL1Q8N7X8 197 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 POC5Q8NA72 575 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 OR51S1Q8NGJ8 323 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 ZFAND2BQ8WV99 257 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 C17orf50Q8WW18 174 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 GIMAP1Q8WWP7 306 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 TOLLIPQ9H0E2 274 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 GFOD1Q9NXC2 390 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 GNG12Q9UBI6 72 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 JPT1Q9UK76 154 aa12.19□□□□□ -0.46
TRIM28-207ENST00000597136 FAM172BPA6NC97 362 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 TUSC2O75896 110 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 PAX6P26367 422 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 BTCP35070 178 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 UBE2E1P51965 193 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 MORN2Q502X0 79 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 MZT2BQ6NZ67 158 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 C9orf139Q6ZV77 190 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 TMEM17Q86X19 198 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 OR10V1Q8NGI7 309 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 OR6F1Q8NGZ6 308 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 AJUBAQ96IF1 538 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 PARP12Q9H0J9 701 aaKnown RBP12.18□□□□□ -0.46
TRIM28-207ENST00000597136 ESM1Q9NQ30 184 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 SLC2A8Q9NY64 477 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 RDH8Q9NYR8 311 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 SESN1Q9Y6P5 492 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 A0A0U1RQK1 487 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 NPFFO15130 113 aa12.18□□□□□ -0.46
TRIM28-207ENST00000597136 YPEL1O60688 119 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms