RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 BSNQ9UPA5 3926 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A10PA6NDY2 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A18PA6NE21 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A16PA6NEW6 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A20PA6NIJ5 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A8PA6NJQ4 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A7PA6NKC0 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A22PA8MWA6 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A12PA8MX19 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A5PA8MXJ8 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A23PA8MXZ1 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 SERPINE2P07093 398 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A15PP0C7V4 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A13PP0C7W8 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A14PP0C7W9 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 FAM90A24PP0C7X0 464 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 S100A2P29034 98 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 OR2T2Q6IF00 324 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 ZNF880Q6PDB4 577 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 BEND4Q6ZU67 534 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 SLC35E3Q7Z769 313 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 MKXQ8IYA7 352 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 RNASE11Q8TAA1 199 aaKnown RBP13□□□□□ -0.33
ZNF541-205ENST00000595558 RHOVQ96L33 236 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 PFDN5Q99471 154 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 OR2W1Q9Y3N9 320 aa13□□□□□ -0.33
ZNF541-205ENST00000595558 OR10J5Q8NHC4 309 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 BOKQ9UMX3 212 aaPredicted RBP12.99□□□□□ -0.33
ZNF541-205ENST00000595558 ARHGAP21Q5T5U3 1957 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 IFNA5P01569 189 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 IGKV1-5P01602 117 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 CD55P08174 381 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 ZNF16P17020 682 aaPredicted RBP12.99□□□□□ -0.33
ZNF541-205ENST00000595558 ZNF787Q6DD87 383 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 HIST3H2BBQ8N257 126 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 SNIP1Q8TAD8 396 aaKnown RBP12.99□□□□□ -0.33
ZNF541-205ENST00000595558 FAM210BQ96KR6 192 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 FAM173AQ9BQD7 235 aa12.99□□□□□ -0.33
ZNF541-205ENST00000595558 DUXBA0A1W2PPF3 345 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 HMGB3O15347 200 aaKnown RBP12.98□□□□□ -0.33
ZNF541-205ENST00000595558 IGHEP01854 428 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 MMP9P14780 707 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 ELLP55199 621 aaPredicted RBP12.98□□□□□ -0.33
ZNF541-205ENST00000595558 SRSF7Q16629 238 aaKnown RBP eCLIP12.98□□□□□ -0.33
ZNF541-205ENST00000595558 PRDM13Q9H4Q3 707 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 OR14J1Q9UGF5 321 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 ZNF729A6NN14 1252 aaPredicted RBP12.98□□□□□ -0.33
ZNF541-205ENST00000595558 CD300LBA8K4G0 201 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 CNOT4O95628 575 aaKnown RBP12.98□□□□□ -0.33
ZNF541-205ENST00000595558 HBE1P02100 147 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 BCL2P10415 239 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 FABP4P15090 132 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 MEOX1P50221 254 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 RNPS1Q15287 305 aaKnown RBP12.98□□□□□ -0.33
ZNF541-205ENST00000595558 H1FOOQ8IZA3 346 aaPredicted RBP12.98□□□□□ -0.33
ZNF541-205ENST00000595558 GCNT2Q8N0V5 402 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 ZNF525Q8N782 197 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 CA5BP1Q8WTZ4 195 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 RCC1LQ96I51 464 aaKnown RBP12.98□□□□□ -0.33
ZNF541-205ENST00000595558 SIRT7Q9NRC8 400 aa12.98□□□□□ -0.33
ZNF541-205ENST00000595558 CXorf65A6NEN9 183 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 PGA5P0DJD9 388 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 TMEM164Q5U3C3 297 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 UNQ6494/PRO21346Q6UXR6 183 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 DLL3Q9NYJ7 618 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 PSENENQ9NZ42 101 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 A0A1B0GU03 582 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 SYNGR2O43760 224 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 NKX6-1P78426 367 aaPredicted RBP12.97□□□□□ -0.33
ZNF541-205ENST00000595558 FAM53AQ6NSI3 398 aaPredicted RBP12.97□□□□□ -0.33
ZNF541-205ENST00000595558 SAXO1Q8IYX7 474 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 OR5P3Q8WZ94 311 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 IL22RA2Q969J5 263 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 TMEM45BQ96B21 275 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 TREM2Q9NZC2 230 aa12.97□□□□□ -0.33
ZNF541-205ENST00000595558 TRAV1-1A0A0B4J248 108 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 SEC14L6B5MCN3 397 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 PPP1R2P9O14990 202 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 DFFBO76075 338 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 CELA3BP08861 270 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 CTXN2P0C2S0 81 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 GPX4P36969 197 aaPredicted RBP12.96□□□□□ -0.33
ZNF541-205ENST00000595558 TESK1Q15569 626 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 ZNF585BQ52M93 769 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 SCGB1C1Q8TD33 95 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 SNX22Q96L94 193 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 PLK3Q9H4B4 646 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 CISD1Q9NZ45 108 aaKnown RBP12.96□□□□□ -0.33
ZNF541-205ENST00000595558 CEBPZOSA8MTT3 80 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 NKX2-8O15522 239 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 IGKV1D-33P01593 117 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 IGKV1-33P01594 117 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 CA6P23280 308 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 WNT5AP41221 380 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 GAMTQ14353 236 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 OR8G1Q15617 311 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 SPANXN5Q5MJ07 72 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 WDR25Q64LD2 544 aaPredicted RBP12.96□□□□□ -0.33
ZNF541-205ENST00000595558 OR10V1Q8NGI7 309 aa12.96□□□□□ -0.33
ZNF541-205ENST00000595558 APOBEC3DQ96AK3 386 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms