RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 MAFIPQ8WZ33 124 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 ADAT1Q9BUB4 502 aaKnown RBP10.54□□□□□ -0.72
SCAF1-202ENST00000595242 NECAP2Q9NVZ3 263 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 POLDIP2Q9Y2S7 368 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 HSPB11Q9Y547 144 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 DNAH9Q9NYC9 4486 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 PLSCR5A0PG75 271 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 OR5H14A6NHG9 310 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 HMSDA8MTL9 139 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 F8VVB4 439 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 F8VWA3 439 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 H0YL77 283 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 NOS1APO75052 506 aaPredicted RBP10.53□□□□□ -0.72
SCAF1-202ENST00000595242 OR7C1O76099 320 aaPredicted RBP10.53□□□□□ -0.72
SCAF1-202ENST00000595242 SFT2D2O95562 160 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 CTSDP07339 412 aaPredicted RBP10.53□□□□□ -0.72
SCAF1-202ENST00000595242 MPV17P39210 176 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 PAX2Q02962 417 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 SPRNQ5BIV9 151 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 FAM58AQ8N1B3 248 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 UXS1Q8NBZ7 420 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 GRPEL2Q8TAA5 225 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 PHB2Q99623 299 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 RTBDNQ9BSG5 229 aaPredicted RBP10.53□□□□□ -0.72
SCAF1-202ENST00000595242 TLNRD1Q9H1K6 362 aa10.53□□□□□ -0.72
SCAF1-202ENST00000595242 RIMS4Q9H426 269 aaPredicted RBP10.53□□□□□ -0.72
SCAF1-202ENST00000595242 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
SCAF1-202ENST00000595242 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.52□□□□□ -0.73
SCAF1-202ENST00000595242 F5H0A9 414 aaPredicted RBP10.52□□□□□ -0.73
SCAF1-202ENST00000595242 SDCBPO00560 298 aaPredicted RBP10.52□□□□□ -0.73
SCAF1-202ENST00000595242 GPR137BO60478 399 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 ATP6V1G1O75348 118 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 PGA5P0DJD9 388 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 OR5H8P0DN80 308 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 RPS2P15880 293 aaKnown RBP10.52□□□□□ -0.73
SCAF1-202ENST00000595242 PRKACAP17612 351 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 NPY4RP50391 375 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 UCP3P55916 312 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 ZNF718Q3SXZ3 478 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 LGALSLQ3ZCW2 172 aaPredicted RBP10.52□□□□□ -0.73
SCAF1-202ENST00000595242 OXLD1Q5BKU9 147 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 ZNF880Q6PDB4 577 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 ZNF767PQ75MW2 155 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 SPERTQ8NA61 448 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 SSMEM1Q8WWF3 244 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 WWC2-AS2Q96NR7 200 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 NRIP2Q9BQI9 281 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 FXYD6Q9H0Q3 95 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 HES4Q9HCC6 221 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 TMEM106BQ9NUM4 274 aa10.52□□□□□ -0.73
SCAF1-202ENST00000595242 IGHV2-70DA0A0C4DH43 119 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 ZSCAN5BA6NJL1 495 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 MLNRO43193 412 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 BPIFB3P59826 476 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 SUPT4H1P63272 117 aaKnown RBP10.51□□□□□ -0.73
SCAF1-202ENST00000595242 IKZF1Q13422 519 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 OR8G1Q15617 311 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 GPR157Q5UAW9 335 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 Q6ZSV7 163 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 GAPTQ8N292 157 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 POC1AQ8NBT0 407 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 SCCPDHQ8NBX0 429 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 WDR89Q96FK6 387 aaPredicted RBP10.51□□□□□ -0.73
SCAF1-202ENST00000595242 ZNF2Q9BSG1 426 aaPredicted RBP10.51□□□□□ -0.73
SCAF1-202ENST00000595242 SSBP3Q9BWW4 388 aaPredicted RBP10.51□□□□□ -0.73
SCAF1-202ENST00000595242 HEXA-AS1Q9H8Q6 139 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 Q9N2K0 584 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 TMEM100Q9NV29 134 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 IL36RNQ9UBH0 155 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 ZDHHC8Q9ULC8 765 aa10.51□□□□□ -0.73
SCAF1-202ENST00000595242 RYR2Q92736 4967 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 RFPL4AA6NLU0 287 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 MCRIP1C9JLW8 97 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 RFPL4AL1F8VTS6 287 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 RHBDL1O75783 438 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 SIX6O95475 246 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 PTBP3O95758 552 aaKnown RBP10.5□□□□□ -0.73
SCAF1-202ENST00000595242 ADH4P08319 380 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 WNT2P09544 360 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 AKR1C4P17516 323 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 C4BPBP20851 252 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 MDH2P40926 338 aaKnown RBP10.5□□□□□ -0.73
SCAF1-202ENST00000595242 FGL1Q08830 312 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 RBM39Q14498 530 aaKnown RBP10.5□□□□□ -0.73
SCAF1-202ENST00000595242 ZNF146Q15072 292 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 SPIN3Q5JUX0 258 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 LIN54Q6MZP7 749 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 Q6P435 159 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 C11orf88Q6PI97 169 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 SUMF2Q8NBJ7 301 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 MOB3AQ96BX8 217 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 C16orf95Q9H693 158 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 RAB18Q9NP72 206 aa10.5□□□□□ -0.73
SCAF1-202ENST00000595242 C14orf166Q9Y224 244 aaKnown RBP10.5□□□□□ -0.73
SCAF1-202ENST00000595242 TRAV14DV4A0A0A6YYC5 116 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 TRAV24A0A0B4J272 114 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 KIR2DS1A0A191URI9 304 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 CD55P08174 381 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 SLC25A4P12235 298 aa10.49□□□□□ -0.73
SCAF1-202ENST00000595242 RPA2P15927 270 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms