RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	RPE	Q96AT9	228 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	YPEL2	Q96QA6	119 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	OCSTAMP	Q9BR26	566 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	ST6GALNAC5	Q9BVH7	336 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	PARP12	Q9H0J9	701 aa	Known RBP	18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	ABCB10	Q9NRK6	738 aa		18.45	■□□□□ 0.54
PNKP-205	ENST00000595081	FAM181B	A6NEQ2	426 aa		18.44	■□□□□ 0.54
PNKP-205	ENST00000595081	GPR137B	O60478	399 aa		18.44	■□□□□ 0.54
PNKP-205	ENST00000595081	KIR2DS4	P43632	304 aa		18.44	■□□□□ 0.54
PNKP-205	ENST00000595081	TAS2R20	P59543	309 aa		18.44	■□□□□ 0.54
PNKP-205	ENST00000595081	PITPNA	Q00169	270 aa		18.44	■□□□□ 0.54
PNKP-205	ENST00000595081	KIR2DS1	Q14954	304 aa		18.44	■□□□□ 0.54
PNKP-205	ENST00000595081	OR4A4P	Q8NGN8	299 aa		18.44	■□□□□ 0.54
PNKP-205	ENST00000595081	ABHD14A	Q9BUJ0	271 aa		18.44	■□□□□ 0.54
PNKP-205	ENST00000595081	HSPA12A	O43301	675 aa		18.43	■□□□□ 0.54
PNKP-205	ENST00000595081	RGS11	O94810	467 aa		18.43	■□□□□ 0.54
PNKP-205	ENST00000595081	MNDA	P41218	407 aa		18.43	■□□□□ 0.54
PNKP-205	ENST00000595081	REG1B	P48304	166 aa		18.43	■□□□□ 0.54
PNKP-205	ENST00000595081	IGSF11	Q5DX21	431 aa		18.43	■□□□□ 0.54
PNKP-205	ENST00000595081	CMTM3	Q96MX0	182 aa		18.43	■□□□□ 0.54
PNKP-205	ENST00000595081	CCDC59	Q9P031	241 aa	Known RBP	18.43	■□□□□ 0.54
PNKP-205	ENST00000595081	OOSP1	A8MZH6	123 aa		18.42	■□□□□ 0.54
PNKP-205	ENST00000595081	ZBTB25	P24278	435 aa		18.42	■□□□□ 0.54
PNKP-205	ENST00000595081	CD24	P25063	80 aa		18.42	■□□□□ 0.54
PNKP-205	ENST00000595081	CEACAM6	P40199	344 aa		18.42	■□□□□ 0.54
PNKP-205	ENST00000595081	ACTG1	P63261	375 aa		18.42	■□□□□ 0.54
PNKP-205	ENST00000595081	SRSF7	Q16629	238 aa	Known RBP eCLIP	18.42	■□□□□ 0.54
PNKP-205	ENST00000595081		Q6ZS49	121 aa		18.42	■□□□□ 0.54
PNKP-205	ENST00000595081	LYG1	Q8N1E2	194 aa		18.42	■□□□□ 0.54
PNKP-205	ENST00000595081	OR2AK2	Q8NG84	335 aa		18.42	■□□□□ 0.54
PNKP-205	ENST00000595081	GCDH	Q92947	438 aa	Predicted RBP	18.42	■□□□□ 0.54
PNKP-205	ENST00000595081		A0A1W2PPI3	338 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	FAM25A	B3EWG3	89 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	FAM25C	B3EWG5	89 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	FAM25G	B3EWG6	89 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	HSD17B6	O14756	317 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	BET1	O15155	118 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	IL3RA	P26951	378 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	DYNLT3	P51808	116 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	LY6G6F	Q5SQ64	297 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	CCDC144NL	Q6NUI1	221 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	GVQW1	Q8N7I0	195 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	ST6GALNAC6	Q969X2	333 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	CABLES2	Q9BTV7	478 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	RSL24D1	Q9UHA3	163 aa	Known RBP	18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	TCF19	Q9Y242	345 aa		18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	MRPS7	Q9Y2R9	242 aa	Known RBP	18.41	■□□□□ 0.54
PNKP-205	ENST00000595081	MEIS3P1	A6NDR6	274 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	CTDSP2	O14595	271 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	TIMM23	O14925	209 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	ST8SIA5	O15466	376 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	FCER2	P06734	321 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	RAB7A	P51149	207 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	ARHGDIB	P52566	201 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	FBLN7	Q53RD9	439 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	CCBE1	Q6UXH8	406 aa	Predicted RBP	18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	TMEM219	Q86XT9	240 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	MIXL1	Q9H2W2	232 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	IFI27L2	Q9H2X8	130 aa		18.4	■□□□□ 0.54
PNKP-205	ENST00000595081	SMIM31	A0A1B0GVY4	71 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	CHST1	O43916	411 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	HLA-DQB1	P01920	261 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	BRS3	P32247	399 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	ZNF137P	P52743	207 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	ZNF816	Q0VGE8	651 aa	Predicted RBP	18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	ODF3L1	Q8IXM7	274 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	DRAM1	Q8N682	238 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	OR56B4	Q8NH76	319 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	SLIRP	Q9GZT3	109 aa	Known RBP	18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	C11orf54	Q9H0W9	315 aa	Predicted RBP	18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	RDH8	Q9NYR8	311 aa		18.39	■□□□□ 0.53
PNKP-205	ENST00000595081	TRBV6-7	A0A0A0MS04	114 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081		A6NDX4	124 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	RGS5	O15539	181 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	GAPDH	P04406	335 aa	Known RBP	18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	CRYBA1	P05813	215 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	OR3A3	P47888	321 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	LAX1	Q8IWV1	398 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	OR8H3	Q8N146	312 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	OR10J5	Q8NHC4	309 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	CFHR4	Q92496	578 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	DCUN1D5	Q9BTE7	237 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	C1RL	Q9NZP8	487 aa		18.38	■□□□□ 0.53
PNKP-205	ENST00000595081	IGHV1-3	A0A0C4DH29	117 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	HKR1	P10072	659 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	RELB	Q01201	579 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	DHRS7B	Q6IAN0	325 aa	Predicted RBP	18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	MOB3B	Q86TA1	216 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	HOGA1	Q86XE5	327 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	SNX29P2	Q8IUI4	249 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	CAPSL	Q8WWF8	208 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	EDARADD	Q8WWZ3	215 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	ABHD14B	Q96IU4	210 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	GINS4	Q9BRT9	223 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	EXTL2	Q9UBQ6	330 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	ANXA10	Q9UJ72	324 aa		18.37	■□□□□ 0.53
PNKP-205	ENST00000595081	SAA2-SAA4	A0A096LPE2	208 aa		18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	IGHV3-72	A0A0B4J1Y9	119 aa		18.36	■□□□□ 0.53
PNKP-205	ENST00000595081	ZNF701	M0R085	212 aa	Predicted RBP	18.36	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms