RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	FAM90A14P	P0C7W9	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A24P	P0C7X0	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	DANCR	P0C864	163 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	IL15RA	Q13261	267 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR8G1	Q15617	311 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	BRICD5	Q6PL45	260 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	POC1A	Q8NBT0	407 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	SCCPDH	Q8NBX0	429 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	ADAD2	Q8NCV1	583 aa	Known RBP	13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	EIF5A2	Q9GZV4	153 aa	Known RBP	13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318		A0A1W2PPE2	198 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	KCNAB3	O43448	404 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	TIMM8A	O60220	97 aa	Predicted RBP	13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	ARG1	P05089	322 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	CSN2	P05814	226 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	FGF7	P21781	194 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	CD40	P25942	277 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	GCH1	P30793	250 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	GAMT	Q14353	236 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	SURF2	Q15527	256 aa	Predicted RBP	13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	MIDN	Q504T8	468 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	VAX1	Q5SQQ9	334 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	LRP11	Q86VZ4	500 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR4K15	Q8NH41	348 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	DYRK2	Q92630	601 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	NDUFAF3	Q9BU61	184 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	PLEKHA2	Q9HB19	425 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	PLCE1	Q9P212	2302 aa		13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	TPR	P12270	2363 aa	Known RBP	13.02	□□□□□ -0.32
DDX39A-209	ENST00000589318	IGKV1D-8	A0A087WSZ0	117 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	OR7C1	O76099	320 aa	Predicted RBP	13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	GLRX	P35754	106 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	ERVK11-1	P61568	191 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	CLEC9A	Q6UXN8	241 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	ST6GALNAC5	Q9BVH7	336 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	MSL2	Q9HCI7	577 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	GPR132	Q9UNW8	380 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	BORCS7-ASMT	A0A0B4J1R7	106 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318		K7EPK0	472 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	DVL1	O14640	695 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	PMP2	P02689	132 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	FUT3	P21217	361 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	CASP6	P55212	293 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	SNU13	P55769	128 aa	Known RBP	13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	SOHLH1	Q5JUK2	328 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318		Q6ZPA2	131 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	FAM71E2	Q8N5Q1	922 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	CD300LF	Q8TDQ1	290 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	TMEM171	Q8WVE6	324 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	MISP3	Q96FF7	219 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	CHD3	Q12873	2000 aa	Known RBP	13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	NBAS	A2RRP1	2371 aa		13.01	□□□□□ -0.33
DDX39A-209	ENST00000589318	IGHV3-64D	A0A0J9YX35	117 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	TMEM210	A6NLX4	147 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	IGHV3-13	P01766	116 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	DAO	P14920	347 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	FPR2	P25090	351 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	LMO1	P25800	156 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	RPL12	P30050	165 aa	Known RBP	13	□□□□□ -0.33
DDX39A-209	ENST00000589318	ZNF674	Q2M3X9	581 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	MPV17L	Q2QL34	196 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	ANKRD39	Q53RE8	183 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	TGIF2LX	Q8IUE1	241 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	C11orf53	Q8IXP5	236 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	RNASEH2C	Q8TDP1	164 aa	Known RBP	13	□□□□□ -0.33
DDX39A-209	ENST00000589318	METTL8	Q9H825	291 aa	Known RBP	13	□□□□□ -0.33
DDX39A-209	ENST00000589318	C19orf12	Q9NSK7	152 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	OSGIN2	Q9Y236	505 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	COL6A6	A6NMZ7	2263 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	IGLV3-9	A0A075B6K5	115 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	SMCO3	A2RU48	225 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	CDIPT	O14735	213 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	PGA5	P0DJD9	388 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	AMY2B	P19961	511 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	DTYMK	P23919	212 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	DUSP1	P28562	367 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	RAB32	Q13637	225 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	KHDC3L	Q587J8	217 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	FAM58A	Q8N1B3	248 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	SUMF2	Q8NBJ7	301 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	CXXC4	Q9H2H0	198 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	ZNF701	Q9NV72	531 aa	Predicted RBP	13	□□□□□ -0.33
DDX39A-209	ENST00000589318	ZDHHC8	Q9ULC8	765 aa		13	□□□□□ -0.33
DDX39A-209	ENST00000589318	KALRN	O60229	2985 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	DPRX	A6NFQ7	191 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318		A8MWP6	167 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	CCL21	O00585	134 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	ATXN7	O15265	892 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BK	O60814	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BJ	P06899	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	GRP	P07492	148 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BO	P23527	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BB	P33778	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	CAMLG	P49069	296 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BD	P58876	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST1H2BC	P62807	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST2H2BE	Q16778	126 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	CLEC18B	Q6UXF7	455 aa		12.99	□□□□□ -0.33
DDX39A-209	ENST00000589318	PEG10	Q86TG7	708 aa	Known RBP	12.99	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms