RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 ODAMA1E959 279 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 TRDCB7Z8K6 153 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 SDCBPO00560 298 aaPredicted RBP16.48■□□□□ 0.23
ATG4D-208ENST00000588667 RBP4P02753 201 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 OR5H8P0DN80 308 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 GLIPR1P48060 266 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 NCR3LG1Q68D85 454 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 C9orf139Q6ZV77 190 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 C11orf42Q8N5U0 333 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 OR6F1Q8NGZ6 308 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 PLPPR1Q8TBJ4 325 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 GIMAP1Q8WWP7 306 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 TNFRSF14Q92956 283 aa16.48■□□□□ 0.23
ATG4D-208ENST00000588667 MS4A7Q9GZW8 240 aaPredicted RBP16.48■□□□□ 0.23
ATG4D-208ENST00000588667 UBE2J1Q9Y385 318 aaPredicted RBP16.48■□□□□ 0.23
ATG4D-208ENST00000588667 TRGV10A0A0A0MS01 117 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 TMEM30CPA0ZSE6 113 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 MEX3AA1L020 520 aaKnown RBP16.47■□□□□ 0.23
ATG4D-208ENST00000588667 C17orf98A8MV24 154 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 SLC35E4Q6ICL7 350 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 ZNF880Q6PDB4 577 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 ZDHHC22Q8N966 263 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 CHAC2Q8WUX2 184 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 C22orf15Q8WYQ4 148 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 SCGB3A2Q96PL1 93 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 NCOR1P1Q9H4R4 102 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 TRAPPC2LQ9UL33 140 aa16.47■□□□□ 0.23
ATG4D-208ENST00000588667 IGHV1-69DA0A0B4J2H0 117 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 C7orf66A4D0T2 115 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 FABP7O15540 132 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 IGHV1-69P01742 117 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 CTXN2P0C2S0 81 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 GSTT2P0CG29 244 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 BRD3OSQ6XYD6 125 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 CORO2AQ92828 525 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 ING3Q9NXR8 418 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 OR6C3Q9NZP0 311 aa16.46■□□□□ 0.23
ATG4D-208ENST00000588667 RNASEK-C17orf49H0YIS7 233 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 ANXA7P20073 488 aaKnown RBP16.45■□□□□ 0.22
ATG4D-208ENST00000588667 ECI1P42126 302 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 GLP1RP43220 463 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 DLX1P56177 255 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 ERVFRD-1P60508 538 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 TUSC1Q2TAM9 212 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 LHFPL1Q86WI0 220 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 CCDC107Q8WV48 283 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 ALX4Q9H161 411 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-208ENST00000588667 GAL3ST2Q9H3Q3 398 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 GPN1Q9HCN4 374 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-208ENST00000588667 KIF25Q9UIL4 384 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 MEIKINA0A087WXM9 373 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 A0A0A6YYJ9 748 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 IL5P05113 134 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 TRAPPC2P0DI81 140 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 TRAPPC2BP0DI82 140 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 HLA-DRB3P79483 266 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 PRB3Q04118 309 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-208ENST00000588667 KLRD1Q13241 179 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 RUSC1-AS1Q66K80 236 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 DHRS11Q6UWP2 260 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 PDZD9Q8IXQ8 264 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 BCL6BQ8N143 479 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-208ENST00000588667 ZNF418Q8TF45 676 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-208ENST00000588667 ZNF2Q9BSG1 426 aaPredicted RBP16.45■□□□□ 0.22
ATG4D-208ENST00000588667 SUCNR1Q9BXA5 334 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 BEX1Q9HBH7 125 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 TAS2R3Q9NYW6 316 aa16.45■□□□□ 0.22
ATG4D-208ENST00000588667 RCC1P18754 421 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-208ENST00000588667 UBE2E1P51965 193 aa16.44■□□□□ 0.22
ATG4D-208ENST00000588667 SURF2Q15527 256 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-208ENST00000588667 GLDNQ6ZMI3 551 aaPredicted RBP16.44■□□□□ 0.22
ATG4D-208ENST00000588667 TMED4Q7Z7H5 227 aa16.44■□□□□ 0.22
ATG4D-208ENST00000588667 OR4A4PQ8NGN8 299 aa16.44■□□□□ 0.22
ATG4D-208ENST00000588667 MRGPRFQ96AM1 343 aa16.44■□□□□ 0.22
ATG4D-208ENST00000588667 GHITMQ9H3K2 345 aa16.44■□□□□ 0.22
ATG4D-208ENST00000588667 HEXA-AS1Q9H8Q6 139 aa16.44■□□□□ 0.22
ATG4D-208ENST00000588667 MBNL3Q9NUK0 354 aaKnown RBP16.44■□□□□ 0.22
ATG4D-208ENST00000588667 HMX3A6NHT5 357 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 TCF21O43680 179 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 SCTP09683 121 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 IGHV1-8P0DP01 117 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 CBX3Q13185 183 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 AADACL3Q5VUY0 350 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 ZNF660Q6AZW8 331 aaPredicted RBP16.43■□□□□ 0.22
ATG4D-208ENST00000588667 HCP5Q6MZN7 132 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 ZNF565Q8N9K5 539 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 MARCH1Q8TCQ1 289 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 PPP1R14BQ96C90 147 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 OR51J1Q9H342 316 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 KCNIP1Q9NZI2 227 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 VSIG4Q9Y279 399 aa16.43■□□□□ 0.22
ATG4D-208ENST00000588667 ZNF729A6NN14 1252 aaPredicted RBP16.42■□□□□ 0.22
ATG4D-208ENST00000588667 IGSF11Q5DX21 431 aa16.42■□□□□ 0.22
ATG4D-208ENST00000588667 AKAP14Q86UN6 197 aa16.42■□□□□ 0.22
ATG4D-208ENST00000588667 NEURL2Q9BR09 285 aa16.42■□□□□ 0.22
ATG4D-208ENST00000588667 OR5H14A6NHG9 310 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 SNRPGP15A8MWD9 76 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 FCGR2CP31995 323 aa16.41■□□□□ 0.22
ATG4D-208ENST00000588667 RRAS2P62070 204 aaPredicted RBP16.41■□□□□ 0.22
ATG4D-208ENST00000588667 C6orf183Q5T699 404 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms