RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 ZBTB25P24278 435 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 NFYBP25208 207 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 ZFP36P26651 326 aaKnown RBP4.36□□□□□ -1.71
LIG3-210ENST00000588109 RFX2P48378 723 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 LGALS4P56470 323 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 LOXL1Q08397 574 aaPredicted RBP4.36□□□□□ -1.71
LIG3-210ENST00000588109 KLF9Q13886 244 aaPredicted RBP4.36□□□□□ -1.71
LIG3-210ENST00000588109 HMGN3Q15651 99 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 SCGB2B2Q4G0G5 96 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 IGSF11Q5DX21 431 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 CT83Q5H943 113 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 PRAMEF5Q5TYX0 476 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 FAAP20Q6NZ36 180 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 ZNF880Q6PDB4 577 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 BTNL3Q6UXE8 466 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 ZNF782Q6ZMW2 699 aaPredicted RBP4.36□□□□□ -1.71
LIG3-210ENST00000588109 Q6ZPA2 131 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 Q6ZS49 121 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 TCF23Q7RTU1 214 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 C5orf24Q7Z6I8 188 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 ZNF554Q86TJ5 538 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 TMEM17Q86X19 198 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 LYSMD2Q8IV50 215 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 ARL6IP6Q8N6S5 226 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 POC5Q8NA72 575 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 CLRN3Q8NCR9 226 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 MAPK1IP1LQ8NDC0 245 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 WFDC11Q8NEX6 87 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 OR4C16Q8NGL9 310 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 OR1L1Q8NH94 360 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 OR10J5Q8NHC4 309 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 CFHR4Q92496 578 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 CORO2AQ92828 525 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 SNAPC3Q92966 411 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 RAX2Q96IS3 184 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 TINAGL1Q9GZM7 467 aaPredicted RBP4.36□□□□□ -1.71
LIG3-210ENST00000588109 HRASLSQ9HDD0 168 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 OR2S2Q9NQN1 319 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 TAS2R3Q9NYW6 316 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 IDI2-AS1Q9NZ38 188 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 GNG12Q9UBI6 72 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 SLC23A1Q9UHI7 598 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 OPN4Q9UHM6 478 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 ZNF107Q9UII5 783 aaPredicted RBP4.36□□□□□ -1.71
LIG3-210ENST00000588109 ANAPC10Q9UM13 185 aa4.36□□□□□ -1.71
LIG3-210ENST00000588109 NAV2Q8IVL1 2488 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 POLQO75417 2590 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 CSMD2Q7Z408 3487 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 IGHV3-43A0A0B4J1X8 118 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 IGHV2-70DA0A0C4DH43 119 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 FAM240BA0A1B0GVZ2 78 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 FAM172BPA6NC97 362 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 NAP1L6A6NFF2 107 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 A8MXK9 166 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 B4DSR2 109 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 C15orf65H3BRN8 121 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 TOR1AO14656 332 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 LYRM1O43325 122 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 RGS11O94810 467 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 DIRAS3O95661 229 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 CD74P04233 296 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 MSMBP08118 114 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OR5H8P0DN80 308 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 IGHV3-43DP0DP04 118 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 NFYAP23511 347 aaPredicted RBP4.35□□□□□ -1.71
LIG3-210ENST00000588109 FCGR2CP31995 323 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 CEACAM6P40199 344 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 GZMKP49863 264 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 DVL1P1P54792 670 aaPredicted RBP4.35□□□□□ -1.71
LIG3-210ENST00000588109 FXYD4P59646 89 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 BPIFB3P59826 476 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 HERV-K104P61576 105 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 ARF6P62330 175 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 HTD2P86397 168 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 IFITM3Q01628 133 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 CD69Q07108 199 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 FOXL1Q12952 345 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 ASAH1Q13510 395 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 DYRK1AQ13627 763 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 HERPUD1Q15011 391 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 C17orf58Q2M2W7 97 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 RGS21Q2M5E4 152 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 TMEM30BQ3MIR4 351 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 VAX1Q5SQQ9 334 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 METTL11BQ5VVY1 283 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 DCAF12L2Q5VW00 463 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 HEPN1Q6WQI6 88 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 IDO2Q6ZQW0 420 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OVCH2Q7RTZ1 564 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 GLCCI1Q86VQ1 547 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 ARRDC1Q8N5I2 433 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 LY6G5BQ8NDX9 201 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OR10A7Q8NGE5 316 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OR52L2PQ8NGH6 319 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OR4D10Q8NGI6 311 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OR10V1Q8NGI7 309 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OR51S1Q8NGJ8 323 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OR6F1Q8NGZ6 308 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 OR56B4Q8NH76 319 aa4.35□□□□□ -1.71
LIG3-210ENST00000588109 C8orf46Q8TAG6 207 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms