RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 MED13LQ71F56 2210 aa12.24□□□□□ -0.45
NFIX-208ENST00000587260 TRAV6A0A075B6T7 132 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 FAM172BPA6NC97 362 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 ARPC1BO15143 372 aaKnown RBP12.23□□□□□ -0.45
NFIX-208ENST00000587260 PEX14O75381 377 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 GZMKP49863 264 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 HERV-K104P61576 105 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 ARF6P62330 175 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 PRB3Q04118 309 aaPredicted RBP12.23□□□□□ -0.45
NFIX-208ENST00000587260 Q3ZCU0 254 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 MORN2Q502X0 79 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 LPCAT3Q6P1A2 487 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 TMEM186Q96B77 213 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 FXYD6Q9H0Q3 95 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 HIF1ANQ9NWT6 349 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 GFOD1Q9NXC2 390 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 INSIG2Q9Y5U4 225 aa12.23□□□□□ -0.45
NFIX-208ENST00000587260 IGHV3-43A0A0B4J1X8 118 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 MMP23AO75900 390 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 RGS11O94810 467 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 DHFRP00374 187 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 TGFAP01135 160 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 CTSDP07339 412 aaPredicted RBP12.22□□□□□ -0.45
NFIX-208ENST00000587260 IGHV3-43DP0DP04 118 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 DVL1P1P54792 670 aaPredicted RBP12.22□□□□□ -0.45
NFIX-208ENST00000587260 GNMTQ14749 295 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 DCAF12L2Q5VW00 463 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 FAM53AQ6NSI3 398 aaPredicted RBP12.22□□□□□ -0.45
NFIX-208ENST00000587260 FAHD2BQ6P2I3 314 aaPredicted RBP12.22□□□□□ -0.45
NFIX-208ENST00000587260 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.22□□□□□ -0.453e-8■■■□□ 16.5
NFIX-208ENST00000587260 C1orf122Q6ZSJ8 110 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 SLC38A6Q8IZM9 456 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 ZFAND1Q8TCF1 268 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 FAHD2AQ96GK7 314 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 ZNF486Q96H40 463 aaPredicted RBP12.22□□□□□ -0.45
NFIX-208ENST00000587260 RTBDNQ9BSG5 229 aaPredicted RBP12.22□□□□□ -0.45
NFIX-208ENST00000587260 RSRP1Q9BUV0 290 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 C5orf66Q9H5L9 145 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 SIRT7Q9NRC8 400 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 GNG12Q9UBI6 72 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 CELSR1Q9NYQ6 3014 aa12.22□□□□□ -0.45
NFIX-208ENST00000587260 A0A087X0M5 115 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 TRAV20A0A0B4J274 112 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 A0A1B0GX30 115 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 PRAF2O60831 178 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 IL5P05113 134 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 NFYBP25208 207 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 PPP1CCP36873 323 aaKnown RBP12.21□□□□□ -0.45
NFIX-208ENST00000587260 LUMP51884 338 aaPredicted RBP12.21□□□□□ -0.45
NFIX-208ENST00000587260 MSMO1Q15800 293 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 METTL11BQ5VVY1 283 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 LDLRAD3Q86YD5 345 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 OR10V1Q8NGI7 309 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 EDARADDQ8WWZ3 215 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 PCGF1Q9BSM1 259 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 ZANQ9Y493 2812 aa12.21□□□□□ -0.45
NFIX-208ENST00000587260 A0A0B4J293 547 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 IGKV1D-13A0A0B4J2D9 117 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 M0R1W7 72 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 IGHV3-7P01780 117 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 RLN1P04808 185 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 IGHV1-8P0DP01 117 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 IGKV1-13P0DP09 117 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 GNRHRP30968 328 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 FXYD4P59646 89 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 UBE2MP61081 183 aaKnown RBP12.21□□□□□ -0.46
NFIX-208ENST00000587260 UTF1Q5T230 341 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 CYB5R2Q6BCY4 276 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 SLC25A42Q86VD7 318 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 KIR3DL3Q8N743 410 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 Q8N7P7 452 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 C8orf31Q8N9H6 132 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 ZNF439Q8NDP4 499 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 LEAP2Q969E1 77 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 AGMATQ9BSE5 352 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 PARP12Q9H0J9 701 aaKnown RBP12.21□□□□□ -0.46
NFIX-208ENST00000587260 ZNF221Q9UK13 617 aa12.21□□□□□ -0.46
NFIX-208ENST00000587260 A0A1B0GVG6 124 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 hCG_1809904A0A1W2PP81 198 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 A0A1W2PPE2 198 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 A0A1W2PR64 198 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 A0A1W2PRV1 198 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 C7orf66A4D0T2 115 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 PGAM2P15259 253 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 ANXA7P20073 488 aaKnown RBP12.2□□□□□ -0.46
NFIX-208ENST00000587260 RAB25P57735 213 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 TAS2R31P59538 309 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 DHODHQ02127 395 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 BAMBIQ13145 260 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 TATDN3Q17R31 274 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 VMO1Q7Z5L0 202 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 TOMM40LQ969M1 308 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 AKR1E2Q96JD6 320 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 C18orf12Q96KH6 178 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 SUCNR1Q9BXA5 334 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 SLC5A7Q9GZV3 580 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 SIRPDQ9H106 197 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 GAB2Q9UQC2 676 aa12.2□□□□□ -0.46
NFIX-208ENST00000587260 C14orf166Q9Y224 244 aaKnown RBP12.2□□□□□ -0.46
NFIX-208ENST00000587260 SESN1Q9Y6P5 492 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms