RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 TMED3Q9Y3Q3 217 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 PPIAL4AQ9Y536 164 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 RBM7Q9Y580 266 aaKnown RBP8.66□□□□□ -1.02
LIG3-203ENST00000585370 ZANQ9Y493 2812 aa8.66□□□□□ -1.02
LIG3-203ENST00000585370 JMJD1CQ15652 2540 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 ARID1AO14497 2285 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 IGHV3OR15-7A0A075B7D8 119 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 A0A1W2PPR1 153 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 DEFB108AA8MXU0 73 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 H0Y980 276 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 TMEM178BH3BS89 294 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 ITGB1BP1O14713 200 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 SIGLEC5O15389 551 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 PHF1O43189 567 aaPredicted RBP8.65□□□□□ -1.02
LIG3-203ENST00000585370 PGLYRP1O75594 196 aaPredicted RBP8.65□□□□□ -1.02
LIG3-203ENST00000585370 OR2F2O95006 317 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 GOSR1O95249 250 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 CYB5R3P00387 301 aaPredicted RBP8.65□□□□□ -1.02
LIG3-203ENST00000585370 HBZP02008 142 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 RLN2P04090 185 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 OR5AC1P0C628 307 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 LOXP28300 417 aaPredicted RBP8.65□□□□□ -1.02
LIG3-203ENST00000585370 CD80P33681 288 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 GLIPR1P48060 266 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 PPOXP50336 477 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 IFITM2Q01629 132 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 OR2F1Q13607 317 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 SPRNQ5BIV9 151 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 ZNF818PQ6ZRF7 136 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 TBC1D26Q86UD7 250 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 MUC15Q8N387 334 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 TCTEX1D1Q8N7M0 179 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 WFDC11Q8NEX6 87 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 GLYATL2Q8WU03 294 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 PPP1R1CQ8WVI7 109 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 EDARADDQ8WWZ3 215 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 CORO2AQ92828 525 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 ARL11Q969Q4 196 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 MSI2Q96DH6 328 aaKnown RBP8.65□□□□□ -1.02
LIG3-203ENST00000585370 WDR89Q96FK6 387 aaPredicted RBP8.65□□□□□ -1.02
LIG3-203ENST00000585370 C18orf12Q96KH6 178 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 TMEM56Q96MV1 263 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 TMEM222Q9H0R3 208 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 CCL28Q9NRJ3 127 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 PLSCR3Q9NRY6 295 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 FAM212BQ9NTI7 297 aaPredicted RBP8.65□□□□□ -1.02
LIG3-203ENST00000585370 TMEM106BQ9NUM4 274 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 LPAR3Q9UBY5 353 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 METRNQ9UJH8 293 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 BOLA1Q9Y3E2 137 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 MAB21L2Q9Y586 359 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 TMEM56-RWDD3S4R434 201 aa8.65□□□□□ -1.02
LIG3-203ENST00000585370 TLN2Q9Y4G6 2542 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 FXYD6-FXYD2A0A087WZ82 144 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 TRGV10A0A0A0MS01 117 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 TRAV39A0A0B4J263 110 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 IGKV1D-13A0A0B4J2D9 117 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 C15orf65H3BRN8 121 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 CCSO14618 274 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 YPEL1O60688 119 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 ZNF205O95201 554 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 MPC2O95563 127 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 CDS2O95674 445 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 HOXB5P09067 269 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 IGKV1-13P0DP09 117 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 FOSL1P15407 271 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 F2RP25116 425 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 UCP1P25874 307 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 S100A11P31949 105 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 NUP62P37198 522 aaPredicted RBP8.64□□□□□ -1.03
LIG3-203ENST00000585370 MEF2CQ06413 473 aaPredicted RBP8.64□□□□□ -1.03
LIG3-203ENST00000585370 IL15RAQ13261 267 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 ZNF345Q14585 488 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 DEFB113Q30KQ7 82 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 GGNBP1Q5YKI7 109 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 ZNF695Q8IW36 515 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 PRR18Q8N4B5 295 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 INO80EQ8NBZ0 244 aaPredicted RBP8.64□□□□□ -1.03
LIG3-203ENST00000585370 OR10A7Q8NGE5 316 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 OR13A1Q8NGR1 328 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 OR1L1Q8NH94 360 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 MRGPRDQ8TDS7 321 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 GAFA1Q96PS6 74 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 YPEL2Q96QA6 119 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 SPIN2AQ99865 258 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 SPIN2BQ9BPZ2 258 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 MFFQ9GZY8 342 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 RAB1BQ9H0U4 201 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 OR2S2Q9NQN1 319 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 OR1A1Q9P1Q5 309 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 JPT1Q9UK76 154 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 ROS1P08922 2347 aa8.64□□□□□ -1.03
LIG3-203ENST00000585370 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 IGHV1-69-2A0A0G2JMI3 117 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 ZNF729A6NN14 1252 aaPredicted RBP8.63□□□□□ -1.03
LIG3-203ENST00000585370 F2RL2O00254 374 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 HSD17B6O14756 317 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 ADAP1O75689 374 aa8.63□□□□□ -1.03
LIG3-203ENST00000585370 PLAUP00749 431 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms