RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 S100A9P06702 114 aaKnown RBP8.64□□□□□ -1.03
RFFL-212ENST00000584655 FGF8P55075 233 aaPredicted RBP8.64□□□□□ -1.03
RFFL-212ENST00000584655 RAG2P55895 527 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 SRSF3P84103 164 aaKnown RBP8.64□□□□□ -1.03
RFFL-212ENST00000584655 MRPL30Q8TCC3 161 aaKnown RBP8.64□□□□□ -1.03
RFFL-212ENST00000584655 Q9N2K0 584 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 VPS13CQ709C8 3753 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 DSCAMO60469 2012 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 FN1P02751 2386 aaKnown RBP8.64□□□□□ -1.03
RFFL-212ENST00000584655 RNF222A6NCQ9 220 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 CEBPZOSA8MTT3 80 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 IGHG3P01860 377 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 CD55P08174 381 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 HOXD4P09016 255 aaPredicted RBP8.64□□□□□ -1.03
RFFL-212ENST00000584655 FAM189A2Q15884 450 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 GPR157Q5UAW9 335 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 UNQ6494/PRO21346Q6UXR6 183 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 CD300LFQ8TDQ1 290 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 ZDHHC16Q969W1 377 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 RNF126Q9BV68 326 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 MRPS18CQ9Y3D5 142 aaKnown RBP8.64□□□□□ -1.03
RFFL-212ENST00000584655 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.64□□□□□ -1.03
RFFL-212ENST00000584655 OR5B21A6NL26 309 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 DAOP14920 347 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 LPAR6P43657 344 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 TAS2R31P59538 309 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 COLCA1Q6ZS62 124 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 LDLRAD3Q86YD5 345 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 CD177Q8N6Q3 437 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 FAM57AQ8TBR7 257 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 C2orf50Q96LR7 162 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 C12orf57Q99622 126 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 OPA3Q9H6K4 179 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 SLC25A15Q9Y619 301 aa8.64□□□□□ -1.03
RFFL-212ENST00000584655 ANKRD17O75179 2603 aaKnown RBP8.63□□□□□ -1.03
RFFL-212ENST00000584655 PRRC2AP48634 2157 aaKnown RBP8.63□□□□□ -1.03
RFFL-212ENST00000584655 TUBAL3A6NHL2 446 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 MMP23AO75900 390 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 CCKARP32238 428 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 KIAA0141Q14154 515 aaPredicted RBP8.63□□□□□ -1.03
RFFL-212ENST00000584655 LCN15Q6UWW0 184 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 LGI3Q8N145 548 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 TMEM204Q9BSN7 226 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 NKX6-2Q9C056 277 aaPredicted RBP8.63□□□□□ -1.03
RFFL-212ENST00000584655 CISD1Q9NZ45 108 aaKnown RBP8.63□□□□□ -1.03
RFFL-212ENST00000584655 RCC2Q9P258 522 aaKnown RBP8.63□□□□□ -1.03
RFFL-212ENST00000584655 PCDHB10Q9UN67 800 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 C2CD3Q4AC94 2353 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 FAM157AC9JC47 383 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 SLC31A2O15432 143 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 S100GP29377 79 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 SMIM21Q3B7S5 101 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 TMEM42Q69YG0 159 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 ACOT7LQ6ZUV0 252 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 ZDHHC22Q8N966 263 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 CXXC4Q9H2H0 198 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 GLS2Q9UI32 602 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 WIPI2Q9Y4P8 454 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 OR13C7P0DN81 318 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 DAZAP2Q15038 168 aaPredicted RBP8.63□□□□□ -1.03
RFFL-212ENST00000584655 HAGHQ16775 308 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 CCDC36Q8IYA8 594 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 OR5C1Q8NGR4 320 aa8.63□□□□□ -1.03
RFFL-212ENST00000584655 PGLYRP1O75594 196 aaPredicted RBP8.62□□□□□ -1.03
RFFL-212ENST00000584655 IGLV3-1P01715 115 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 ZP3P21754 424 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 RPL30P62888 115 aaKnown RBP8.62□□□□□ -1.03
RFFL-212ENST00000584655 RBPJQ06330 500 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 GUCA2BQ16661 112 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 Q6ZRM9 215 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 LILRB2Q8N423 598 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 SPICQ8N5J4 248 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 GCSAMQ8N6F7 178 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 NRGNQ92686 78 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 PTX4Q96A99 478 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 TM2D1Q9BX74 207 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 SIRT7Q9NRC8 400 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 PLSCR4Q9NRQ2 329 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 DYSFO75923 2080 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 KIR2DS1A0A191URI9 304 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 LRP5LA4QPB2 252 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 C17orf98A8MV24 154 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 ST8SIA3O43173 380 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 SNRNP70P08621 437 aaKnown RBP8.62□□□□□ -1.03
RFFL-212ENST00000584655 FBP1P09467 338 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 KIR2DS4P43632 304 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 GPR12P47775 334 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 CAMLGP49069 296 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 ZNF273Q14593 569 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 KIR2DS1Q14954 304 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 VAX1Q5SQQ9 334 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 LYPD2Q6UXB3 125 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 ETV3LQ6ZN32 361 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 FAM90A1Q86YD7 464 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 KIR3DL3Q8N743 410 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 PINX1Q96BK5 328 aaKnown RBP8.62□□□□□ -1.03
RFFL-212ENST00000584655 RSG1Q9BU20 258 aa8.62□□□□□ -1.03
RFFL-212ENST00000584655 AURKAIP1Q9NWT8 199 aaPredicted RBP8.62□□□□□ -1.03
RFFL-212ENST00000584655 SELENOKQ9Y6D0 94 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms