RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 IFITM3Q01628 133 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 RBM39Q14498 530 aaKnown RBP16.46■□□□□ 0.23
SRSF1-206ENST00000583741 ZNF273Q14593 569 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 PAN3Q58A45 887 aaKnown RBP16.46■□□□□ 0.23
SRSF1-206ENST00000583741 TRAPPC6BQ86SZ2 158 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 WNT10AQ9GZT5 417 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 SEBOXQ9HB31 216 aaPredicted RBP16.46■□□□□ 0.23
SRSF1-206ENST00000583741 AK3Q9UIJ7 227 aa16.46■□□□□ 0.23
SRSF1-206ENST00000583741 DSCAML1Q8TD84 2053 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 A6NDX4 124 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 LANCL1O43813 399 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 SSX5O60225 188 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 RBBP9O75884 186 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 LMO1P25800 156 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 GDNFP39905 211 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 COL10A1Q03692 680 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 LDLRAD2Q5SZI1 272 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 STEAP3Q658P3 488 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 Q6ZS46 218 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 CMSS1Q9BQ75 279 aaKnown RBP16.45■□□□□ 0.22
SRSF1-206ENST00000583741 KLK11Q9UBX7 282 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 MTFP1Q9UDX5 166 aa16.45■□□□□ 0.22
SRSF1-206ENST00000583741 RBMX2Q9Y388 322 aaKnown RBP16.45■□□□□ 0.22
SRSF1-206ENST00000583741 ORC5O43913 435 aa16.44■□□□□ 0.22
SRSF1-206ENST00000583741 IGLL1P15814 213 aa16.44■□□□□ 0.22
SRSF1-206ENST00000583741 ACTBP60709 375 aa16.44■□□□□ 0.22
SRSF1-206ENST00000583741 SSBP1Q04837 148 aaKnown RBP16.44■□□□□ 0.22
SRSF1-206ENST00000583741 VAX1Q5SQQ9 334 aa16.44■□□□□ 0.22
SRSF1-206ENST00000583741 LYSMD2Q8IV50 215 aa16.44■□□□□ 0.22
SRSF1-206ENST00000583741 A0A1W2PPH5 198 aa16.43■□□□□ 0.22
SRSF1-206ENST00000583741 TMEM95Q3KNT9 176 aa16.43■□□□□ 0.22
SRSF1-206ENST00000583741 ZNF57Q68EA5 555 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-206ENST00000583741 ZNF561Q8N587 486 aa16.43■□□□□ 0.22
SRSF1-206ENST00000583741 ASCC1Q8N9N2 400 aaKnown RBP16.43■□□□□ 0.22
SRSF1-206ENST00000583741 HDHD3Q9BSH5 251 aaPredicted RBP16.43■□□□□ 0.22
SRSF1-206ENST00000583741 C12orf4Q9NQ89 552 aa16.43■□□□□ 0.22
SRSF1-206ENST00000583741 IFT46Q9NQC8 304 aa16.43■□□□□ 0.22
SRSF1-206ENST00000583741 ETAA1Q9NY74 926 aa16.43■□□□□ 0.22
SRSF1-206ENST00000583741 ODF3BA8MYP8 253 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 PSPNO60542 156 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 CBX5P45973 191 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 DLX6P56179 175 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 C11orf87Q6NUJ2 197 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 TOMM5Q8N4H5 51 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 PRSS22Q9GZN4 317 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 CHST6Q9GZX3 395 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 hCG_1809904A0A1W2PP81 198 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 A0A1W2PPE2 198 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 A0A1W2PR64 198 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 A0A1W2PRV1 198 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 A0A1W2PRX2 142 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 TMEM82A0PJX8 343 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 K7EIL1 84 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 RCVRNP35243 200 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 BLCAPP62952 87 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 ATXN7L3Q14CW9 347 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-206ENST00000583741 SSX2Q16385 188 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 WFDC9Q8NEX5 89 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 OCSTAMPQ9BR26 566 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 CHMP1AQ9HD42 196 aaPredicted RBP16.42■□□□□ 0.22
SRSF1-206ENST00000583741 TAS2R8Q9NYW2 309 aa16.42■□□□□ 0.22
SRSF1-206ENST00000583741 LINC00854A0A1B0GVQ3 168 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 MEX3AA1L020 520 aaKnown RBP16.41■□□□□ 0.22
SRSF1-206ENST00000583741 C17orf98A8MV24 154 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 ZNF737O75373 536 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 PEX14O75381 377 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 ARG1P05089 322 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 FCER2P06734 321 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 GSTT2BP0CG30 244 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 CD33P20138 364 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 OR3A1P47881 315 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 KCNJ3P48549 501 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 AP3S2P59780 193 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 GVQW1Q8N7I0 195 aa16.41■□□□□ 0.22
SRSF1-206ENST00000583741 TBL2Q9Y4P3 447 aaKnown RBP16.41■□□□□ 0.22
SRSF1-206ENST00000583741 ANKRD20A5PA0PJZ0 165 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 NAPSAO96009 420 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 TK1P04183 234 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 FCGR3AP08637 254 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 DTYMKP23919 212 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 DEFA1P59665 94 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 DEFA3P59666 94 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 PLPPR1Q8TBJ4 325 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 MALSU1Q96EH3 234 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 SNX22Q96L94 193 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 RIMS4Q9H426 269 aaPredicted RBP16.4■□□□□ 0.22
SRSF1-206ENST00000583741 ZNF230Q9UIE0 474 aaPredicted RBP16.4■□□□□ 0.22
SRSF1-206ENST00000583741 ANAPC10Q9UM13 185 aa16.4■□□□□ 0.22
SRSF1-206ENST00000583741 CSN2P05814 226 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 CD83Q01151 205 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 KLF9Q13886 244 aaPredicted RBP16.39■□□□□ 0.21
SRSF1-206ENST00000583741 GRK1Q15835 563 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 ZNF626Q68DY1 528 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 SETD6Q8TBK2 473 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 ST6GALNAC5Q9BVH7 336 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 ING3Q9NXR8 418 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 ZNF107Q9UII5 783 aaPredicted RBP16.39■□□□□ 0.21
SRSF1-206ENST00000583741 PITPNC1Q9UKF7 332 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 TBC1D24Q9ULP9 559 aa16.39■□□□□ 0.21
SRSF1-206ENST00000583741 K7N7A8 449 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms