RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 A0A1B0GU03 582 aa18.95■□□□□ 0.62
CCDC47-204ENST00000582252 VSTM5A8MXK1 200 aa18.95■□□□□ 0.62
CCDC47-204ENST00000582252 FGF16O43320 207 aa18.95■□□□□ 0.62
CCDC47-204ENST00000582252 LHBP01229 141 aa18.95■□□□□ 0.62
CCDC47-204ENST00000582252 ADORA2A-AS1P86434 159 aa18.95■□□□□ 0.62
CCDC47-204ENST00000582252 UBALD1Q8TB05 177 aa18.95■□□□□ 0.62
CCDC47-204ENST00000582252 FAM216AQ8WUB2 273 aa18.95■□□□□ 0.62
CCDC47-204ENST00000582252 LSM10Q969L4 123 aaKnown RBP18.95■□□□□ 0.62
CCDC47-204ENST00000582252 RNF7Q9UBF6 113 aa18.95■□□□□ 0.62
CCDC47-204ENST00000582252 IGKV1D-17A0A075B6S4 117 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 ZNF737O75373 536 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 IGLV2-14P01704 120 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 ADH4P08319 380 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 FGF2P09038 288 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 GZMHP20718 246 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 GLIPR1P48060 266 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 VAMP2P63027 116 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 RPL7L1Q6DKI1 246 aaKnown RBP18.94■□□□□ 0.62
CCDC47-204ENST00000582252 C22orf34Q6ZV56 151 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 TMED6Q8WW62 240 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 BBC3Q96PG8 261 aaPredicted RBP18.94■□□□□ 0.62
CCDC47-204ENST00000582252 RAB9BQ9NP90 201 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 KRBOX1C9JBD0 128 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 ABCD4O14678 606 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 SHOXO15266 292 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 IGHV1-46P01743 117 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 ZP3P21754 424 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 HTD2P86397 168 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 FBXL19-AS1Q494R0 122 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 C4orf17Q53FE4 359 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 DRAM1Q8N682 238 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 DMBX1Q8NFW5 382 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 ARL11Q969Q4 196 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 SLC25A31Q9H0C2 315 aa18.94■□□□□ 0.62
CCDC47-204ENST00000582252 ANKHD1Q8IWZ3 2542 aaKnown RBP18.93■□□□□ 0.62
CCDC47-204ENST00000582252 B8ZZF3 427 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 WRBO00258 174 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 IRF2P14316 349 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 GNLYP22749 145 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 HOXA4Q00056 320 aaPredicted RBP18.93■□□□□ 0.62
CCDC47-204ENST00000582252 CATR1Q13166 79 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 UBAC2Q8NBM4 344 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 Q8TCH9 128 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 NCOR1P1Q9H4R4 102 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 BARX1Q9HBU1 254 aaPredicted RBP18.93■□□□□ 0.62
CCDC47-204ENST00000582252 FAM208BQ5VWN6 2430 aa18.93■□□□□ 0.62
CCDC47-204ENST00000582252 KMT2BQ9UMN6 2715 aaPredicted RBP18.92■□□□□ 0.62
CCDC47-204ENST00000582252 A8MXK9 166 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 NUDT19A8MXV4 375 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 EDDM3AQ14507 147 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 OR2C3Q8N628 320 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 OR52L2PQ8NGH6 319 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 OR13A1Q8NGR1 328 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 LRRC46Q96FV0 321 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 OR2D2Q9H210 308 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 TAS2R3Q9NYW6 316 aa18.92■□□□□ 0.62
CCDC47-204ENST00000582252 ODAMA1E959 279 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 DPRXA6NFQ7 191 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 TFF1P04155 84 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 ZNF16P17020 682 aaPredicted RBP18.91■□□□□ 0.62
CCDC47-204ENST00000582252 UQCRFS1P47985 274 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 ID3Q02535 119 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 ZNF561Q8N587 486 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 TCTEX1D1Q8N7M0 179 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 FAM222BQ8WU58 562 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 EDARADDQ8WWZ3 215 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 SAT2Q96F10 170 aaPredicted RBP18.91■□□□□ 0.62
CCDC47-204ENST00000582252 PLCE1Q9P212 2302 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 FAM90A27PA6NNH2 459 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 K7N7A8 449 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 ATG12O94817 140 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 THBDP07204 575 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 TNFRSF1AP19438 455 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 AKR1C2P52895 323 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 POLR2GP62487 172 aaKnown RBP eCLIP18.91■□□□□ 0.62
CCDC47-204ENST00000582252 BSPH1Q075Z2 132 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 CA5BP1Q8WTZ4 195 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 PARP12Q9H0J9 701 aaKnown RBP18.91■□□□□ 0.62
CCDC47-204ENST00000582252 C11orf1Q9H5F2 150 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 GCM1Q9NP62 436 aa18.91■□□□□ 0.62
CCDC47-204ENST00000582252 IGHV3OR15-7A0A075B7D8 119 aa18.9■□□□□ 0.62
CCDC47-204ENST00000582252 SSSCA1O60232 199 aa18.9■□□□□ 0.62
CCDC47-204ENST00000582252 CR1LQ2VPA4 569 aa18.9■□□□□ 0.62
CCDC47-204ENST00000582252 RNASE6Q93091 150 aaKnown RBP18.9■□□□□ 0.62
CCDC47-204ENST00000582252 SMIM3Q9BZL3 60 aa18.9■□□□□ 0.62
CCDC47-204ENST00000582252 FAM212BQ9NTI7 297 aaPredicted RBP18.9■□□□□ 0.62
CCDC47-204ENST00000582252 OR6C3Q9NZP0 311 aa18.9■□□□□ 0.62
CCDC47-204ENST00000582252 ZNF462Q96JM2 2506 aa18.9■□□□□ 0.62
CCDC47-204ENST00000582252 SSTR5P35346 364 aa18.89■□□□□ 0.61
CCDC47-204ENST00000582252 EWSR1Q01844 656 aaKnown RBP eCLIP18.89■□□□□ 0.61
CCDC47-204ENST00000582252 KIAA2026Q5HYC2 2103 aa18.89■□□□□ 0.61
CCDC47-204ENST00000582252 TPRX1Q8N7U7 411 aa18.89■□□□□ 0.61
CCDC47-204ENST00000582252 MARC2Q969Z3 335 aa18.89■□□□□ 0.61
CCDC47-204ENST00000582252 GPR146Q96CH1 333 aa18.89■□□□□ 0.61
CCDC47-204ENST00000582252 LYRM2Q9NU23 88 aaPredicted RBP18.89■□□□□ 0.61
CCDC47-204ENST00000582252 LPAR3Q9UBY5 353 aa18.89■□□□□ 0.61
CCDC47-204ENST00000582252 JPT1Q9UK76 154 aa18.89■□□□□ 0.61
CCDC47-204ENST00000582252 ADGRG4Q8IZF6 3080 aa18.89■□□□□ 0.61
CCDC47-204ENST00000582252 RAB19A4D1S5 217 aa18.88■□□□□ 0.61
CCDC47-204ENST00000582252 C15orf65H3BRN8 121 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms