RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 FBXW9Q5XUX1 488 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 TMEM183AQ8IXX5 376 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 HARBI1Q96MB7 349 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 PAXXQ9BUH6 204 aa9.33□□□□□ -0.92
SEC22B-201ENST00000578049 FAM186AA6NE01 2351 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 TRAV9-1A0A075B6T8 112 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 FABP2P12104 132 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 AGAP20933 346 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 TNXAQ16473 311 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 OR4A47Q6IF82 309 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 TMEM92Q6UXU6 159 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 SCNM1Q9BWG6 230 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 C5orf66Q9H5L9 145 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 GAGE10A6NGK3 116 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 SIAH2O43255 324 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 MT-CO3P00414 261 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 IGHMP01871 453 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 GNB2P62879 340 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 SLC25A34Q6PIV7 304 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 GALNT14Q96FL9 552 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 CLEC1BQ9P126 229 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 CENPVL1A0A0U1RR11 272 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 ZNF729A6NN14 1252 aaPredicted RBP9.32□□□□□ -0.92
SEC22B-201ENST00000578049 G6PCP35575 357 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 ELOVL1Q9BW60 279 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 HYPMO75409 117 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 GOSR1O95249 250 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 RECKO95980 971 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 IGKV1D-16P01601 117 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 CD82P27701 267 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 TSPAN7P41732 249 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 KIR2DL1P43626 348 aaPredicted RBP9.32□□□□□ -0.92
SEC22B-201ENST00000578049 IBA57Q5T440 356 aaKnown RBP9.32□□□□□ -0.92
SEC22B-201ENST00000578049 CTHRC1Q96CG8 243 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 PLPPR2Q96GM1 343 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 HEXA-AS1Q9H8Q6 139 aa9.32□□□□□ -0.92
SEC22B-201ENST00000578049 SRSF9Q13242 221 aaKnown RBP eCLIP9.32□□□□□ -0.92
SEC22B-201ENST00000578049 SH2D7A6NKC9 451 aaPredicted RBP9.31□□□□□ -0.92
SEC22B-201ENST00000578049 HRKO00198 91 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 NDUFB4O95168 129 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 RPL7P18124 248 aaKnown RBP9.31□□□□□ -0.92
SEC22B-201ENST00000578049 MC5RP33032 325 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 GAMTQ14353 236 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 DEFB109BQ30KR1 87 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 GBGT1Q8N5D6 347 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 TMEM52Q8NDY8 209 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 Q96M66 194 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 C5orf67F2Z3F1 127 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 PSMB2P49721 201 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 DLX1P56177 255 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 RFLNBQ8N5W9 214 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 PCGF1Q9BSM1 259 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 F5H697 171 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 CLDN18P56856 261 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 ZNF362Q5T0B9 420 aaPredicted RBP9.31□□□□□ -0.92
SEC22B-201ENST00000578049 DIRC2Q96SL1 478 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 FAM206AQ9NX38 181 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 TCFL5Q9UL49 500 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 CDK5RAP2Q96SN8 1893 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 H0YL77 283 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 CLDN14O95500 239 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 FOLR2P14207 255 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 RPS20P60866 119 aaKnown RBP9.31□□□□□ -0.92
SEC22B-201ENST00000578049 SPINK9Q5DT21 86 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 CYB5R2Q6BCY4 276 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 LAMTOR1Q6IAA8 161 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 DGAT2L7PQ6IED9 249 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 OR8I2Q8N0Y5 310 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 SPSB4Q96A44 273 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 GGACTQ9BVM4 153 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 K7EQS6 105 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 LGALS7P47929 136 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 CALHM1Q8IU99 346 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 RSG1Q9BU20 258 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 CLN8Q9UBY8 286 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 ZDHHC8Q9ULC8 765 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 PTPRZ1P23471 2315 aaPredicted RBP9.31□□□□□ -0.92
SEC22B-201ENST00000578049 LY75O60449 1722 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 IGKV1-8A0A0C4DH67 115 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 IGLV3-21P80748 117 aaPredicted RBP9.31□□□□□ -0.92
SEC22B-201ENST00000578049 C16orf47Q6ZP98 133 aaPredicted RBP9.31□□□□□ -0.92
SEC22B-201ENST00000578049 DCAF16Q9NXF7 216 aa9.31□□□□□ -0.92
SEC22B-201ENST00000578049 FOCADQ5VW36 1801 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 LEPROTL1O95214 131 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 CA2P00918 260 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 SMIM10L1P0DMW3 83 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 AREGP15514 252 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 SPATA45Q537H7 98 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 TUSC5Q8IXB3 177 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 SMIM10Q96HG1 83 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 QTRT1Q9BXR0 403 aaKnown RBP9.3□□□□□ -0.92
SEC22B-201ENST00000578049 MS4A5Q9H3V2 200 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 TINAGQ9UJW2 476 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 DTX4Q9Y2E6 619 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 LYZL6O75951 148 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 C1QL1O75973 258 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 C2orf68Q2NKX9 166 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 CCDC144NLQ6NUI1 221 aa9.3□□□□□ -0.92
SEC22B-201ENST00000578049 CYP2G1PQ6ZSU1 146 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms