RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 RAB3CQ96E17 227 aa12.78□□□□□ -0.36
VAPA-204ENST00000577901 ARHGAP5-AS1Q96IT6 56 aa12.78□□□□□ -0.36
VAPA-204ENST00000577901 CYYR1Q96J86 154 aa12.78□□□□□ -0.36
VAPA-204ENST00000577901 PECRQ9BY49 303 aa12.78□□□□□ -0.36
VAPA-204ENST00000577901 JPT1Q9UK76 154 aa12.78□□□□□ -0.36
VAPA-204ENST00000577901 MGAT4AQ9UM21 535 aa12.78□□□□□ -0.36
VAPA-204ENST00000577901 TRBV6-6A0A0A6YYG2 114 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 SMIM30A4D0T7 59 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 RGS11O94810 467 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 SLC2A2P11168 524 aaPredicted RBP12.77□□□□□ -0.37
VAPA-204ENST00000577901 HMGN3Q15651 99 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 MORN2Q502X0 79 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 ARSJQ5FYB0 599 aaPredicted RBP12.77□□□□□ -0.37
VAPA-204ENST00000577901 ZNF880Q6PDB4 577 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 Q6ZS46 218 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 THNSL2Q86YJ6 484 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 CMSS1Q9BQ75 279 aaKnown RBP12.77□□□□□ -0.37
VAPA-204ENST00000577901 C12orf4Q9NQ89 552 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 DAPK2Q9UIK4 370 aa12.77□□□□□ -0.37
VAPA-204ENST00000577901 A0A0B4J203 849 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 HSD17B6O14756 317 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 YPEL1O60688 119 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 IGLL1P15814 213 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 CD33P20138 364 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 VDAC2P45880 294 aaPredicted RBP12.76□□□□□ -0.37
VAPA-204ENST00000577901 BLCAPP62952 87 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 MXD1Q05195 221 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 ZNF816Q0VGE8 651 aaPredicted RBP12.76□□□□□ -0.37
VAPA-204ENST00000577901 PLA2G7Q13093 441 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 CT45A1Q5HYN5 189 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 PLAC9Q5JTB6 97 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 FAM53AQ6NSI3 398 aaPredicted RBP12.76□□□□□ -0.37
VAPA-204ENST00000577901 SFXN4Q6P4A7 337 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 SLC25A48Q6ZT89 311 aaKnown RBP12.76□□□□□ -0.37
VAPA-204ENST00000577901 DRAM1Q8N682 238 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 WFDC9Q8NEX5 89 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 OR52L2PQ8NGH6 319 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 OR10R2Q8NGX6 335 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 CT45A3Q8NHU0 189 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 IL1F10Q8WWZ1 152 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 RBM14Q96PK6 669 aaKnown RBP12.76□□□□□ -0.37
VAPA-204ENST00000577901 YPEL2Q96QA6 119 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 CENPOQ9BU64 300 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 ATG5Q9H1Y0 275 aa12.76□□□□□ -0.37
VAPA-204ENST00000577901 A0A1W2PPI3 338 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 A0A1W2PRX2 142 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 SLC31A2O15432 143 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 AIREO43918 545 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 CD3GP09693 182 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 ZNF134P52741 427 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 ARL6IP1Q15041 203 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 TMEM95Q3KNT9 176 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 LY6G6FQ5SQ64 297 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 MOB3BQ86TA1 216 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 ZNF439Q8NDP4 499 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 OR56B4Q8NH76 319 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 HDHD3Q9BSH5 251 aaPredicted RBP12.75□□□□□ -0.37
VAPA-204ENST00000577901 SLC25A33Q9BSK2 321 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 RNF167Q9H6Y7 350 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 Q9N2K0 584 aa12.75□□□□□ -0.37
VAPA-204ENST00000577901 IGHV1-3A0A0C4DH29 117 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 FAM90A9PA6NNJ1 464 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 M0QZK8 103 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 RAB27BO00194 218 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 TXNL1O43396 289 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 OR2F2O95006 317 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 REG1BP48304 166 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 HES1Q14469 280 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 MOGAT2Q3SYC2 334 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 VAX1Q5SQQ9 334 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 C5orf24Q7Z6I8 188 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 OR5AU1Q8NGC0 362 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 RTN4IP1Q8WWV3 396 aaPredicted RBP12.74□□□□□ -0.37
VAPA-204ENST00000577901 ST6GALNAC6Q969X2 333 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 YIPF6Q96EC8 236 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 ABHD14AQ9BUJ0 271 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 COL7A1Q02388 2944 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 DNAH9Q9NYC9 4486 aa12.74□□□□□ -0.37
VAPA-204ENST00000577901 A0A075B6Q4 140 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 TRIM64CA6NLI5 447 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 SERPINE3A8MV23 424 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 TMEM127O75204 238 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 SCGNO76038 276 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 SNRNP70P08621 437 aaKnown RBP12.73□□□□□ -0.37
VAPA-204ENST00000577901 CLEC2LP0C7M8 214 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 PF4V1P10720 104 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 GNB3P16520 340 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 TMEM11P17152 192 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 ZBTB25P24278 435 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 PPP1CCP36873 323 aaKnown RBP12.73□□□□□ -0.37
VAPA-204ENST00000577901 ZNF137PP52743 207 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 SCAND1P57086 179 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 HLA-DRB3P79483 266 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 CD83Q01151 205 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 GNMTQ14749 295 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 IDNKQ5T6J7 187 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 TGIF2LXQ8IUE1 241 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 CROCCP3Q8IVE0 287 aa12.73□□□□□ -0.37
VAPA-204ENST00000577901 OR2AK2Q8NG84 335 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms