RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 SPCS2Q15005 226 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 HMGN3Q15651 99 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 SSX2Q16385 188 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 LY6EQ16553 131 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 HLA-DRB5Q30154 266 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 TOR2AQ5JU69 321 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 CCBE1Q6UXH8 406 aaPredicted RBP7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 LCNL1Q6ZST4 164 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 Q6ZTK2 550 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 IZUMO1Q8IYV9 350 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 OR52L2PQ8NGH6 319 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 OR56B1Q8NGI3 324 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 FAM216AQ8WUB2 273 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 RAB3CQ96E17 227 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 SSX3Q99909 188 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 KRTAP4-8Q9BYQ9 185 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 ATG5Q9H1Y0 275 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 FAM96BQ9Y3D0 163 aa7.61□□□□□ -1.19
NPLOC4-219ENST00000576713 VWFP04275 2813 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 PKD1L1Q8TDX9 2849 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 BUB1B-PAK6H3BSN5 160 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 J3QR06 171 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 SDCBPO00560 298 aaPredicted RBP7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 CHST1O43916 411 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 SSX5O60225 188 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 GPR137BO60478 399 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 CA11O75493 328 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 HIST1H1DP16402 221 aaKnown RBP7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 GZMHP20718 246 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 PPP1CCP36873 323 aaKnown RBP7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 HERPUD1Q15011 391 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 TIMM50Q3ZCQ8 353 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 CT45A1Q5HYN5 189 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 OR52W1Q6IF63 320 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 RBMS3Q6XE24 437 aaKnown RBP7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 SYT8Q8NBV8 401 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 CT45A3Q8NHU0 189 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 SSMEM1Q8WWF3 244 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 PTX4Q96A99 478 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 SLC25A46Q96AG3 418 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 MMP28Q9H239 520 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 Q9N2K0 584 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 RHBDL2Q9NX52 303 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 OR1A1Q9P1Q5 309 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 ZNF230Q9UIE0 474 aaPredicted RBP7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 TBL2Q9Y4P3 447 aaKnown RBP7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 KIAA2026Q5HYC2 2103 aa7.6□□□□□ -1.19
NPLOC4-219ENST00000576713 TRBV6-6A0A0A6YYG2 114 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 VGLL3A8MV65 326 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 TRIM77I1YAP6 450 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 FCGR3AP08637 254 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 SCTP09683 121 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 CD3GP09693 182 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 HTR1DP28221 377 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 FAM189A2Q15884 450 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 LRRC75BQ2VPJ9 315 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 ZNF260Q3ZCT1 412 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 TPTE2P1Q5T6R2 138 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 C16orf87Q6PH81 154 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 GPR141Q7Z602 305 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 TMEM219Q86XT9 240 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 CLVS1Q8IUQ0 354 aaPredicted RBP7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 ODF3L1Q8IXM7 274 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 TMEM86BQ8N661 226 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 OR9G1Q8NH87 305 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 SETD6Q8TBK2 473 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 ZNF596Q8TC21 504 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 ZFAND2BQ8WV99 257 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 NUDCD2Q8WVJ2 157 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 GCDHQ92947 438 aaPredicted RBP7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 MALSU1Q96EH3 234 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 CMSS1Q9BQ75 279 aaKnown RBP7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 CHMP1AQ9HD42 196 aaPredicted RBP7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 C12orf4Q9NQ89 552 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 C1RLQ9NZP8 487 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 VPREB3Q9UKI3 123 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 POMT1Q9Y6A1 747 aa7.59□□□□□ -1.19
NPLOC4-219ENST00000576713 A0A1W2PPI3 338 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 A6NDX4 124 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 TMEM235A6NFC5 223 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 EIF4EP06730 217 aaKnown RBP7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 HKR1P10072 659 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 REG1BP48304 166 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 HLA-DRB3P79483 266 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 MADCAM1Q13477 382 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 CDNFQ49AH0 187 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 MORN2Q502X0 79 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 C6orf183Q5T699 404 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 MINOS1Q5TGZ0 78 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 SLC25A48Q6ZT89 311 aaKnown RBP7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 OR10A7Q8NGE5 316 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 OR52M1Q8NGK5 317 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 IL1F10Q8WWZ1 152 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 CFHR4Q92496 578 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 ST6GALNAC6Q969X2 333 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 DCSTAMPQ9H295 470 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 OR2S2Q9NQN1 319 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 DPM3Q9P2X0 92 aa7.58□□□□□ -1.2
NPLOC4-219ENST00000576713 SPATA2Q9UM82 520 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms