RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 LIME1Q9H400 295 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 BET1LQ9NYM9 111 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 WIPI2Q9Y4P8 454 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 MYO7BQ6PIF6 2116 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 PHF3Q92576 2039 aaKnown RBP8.24□□□□□ -1.09
CCDC40-212ENST00000574799 IGHV3-20A0A0C4DH32 117 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 C19orf67A6NJJ6 358 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 GDF9O60383 454 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 FOXF1Q12946 379 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 PLCXD3Q63HM9 321 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 SPEM1Q8N4L4 309 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 MOB3AQ96BX8 217 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 IMMP2LQ96T52 175 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 B3GAT1Q9P2W7 334 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 CACNG5Q9UF02 275 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 NCKAP5O14513 1909 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 ESPL1Q14674 2120 aa8.24□□□□□ -1.09
CCDC40-212ENST00000574799 A0A1W2PPV4 95 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 F6UZH7 168 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 FCN1O00602 326 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 TCN2P20062 427 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 CCNOP22674 350 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 IL3RAP26951 378 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 RAB35Q15286 201 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 TDRG1Q3Y452 100 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 VHLLQ6RSH7 139 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 GJC3Q8NFK1 279 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 RAB40CQ96S21 281 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 PCED1AQ9H1Q7 454 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 CCL28Q9NRJ3 127 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 ANAPC10Q9UM13 185 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 FAM58AQ8N1B3 248 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 KLHDC1Q8N7A1 406 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 OR10G4Q8NGN3 311 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 BORCS7Q96B45 105 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF581Q9P0T4 197 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 KIR2DL5BA0A0G2JN68 375 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 KIR2DL5BA0A0G2JPC4 375 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 SRP14P37108 136 aaKnown RBP8.23□□□□□ -1.09
CCDC40-212ENST00000574799 ATOH7Q8N100 152 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 KIR2DL5AQ8N109 375 aa8.23□□□□□ -1.09
CCDC40-212ENST00000574799 BLACEA4D250 179 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 C11orf94C9JXX5 98 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 CBLN1P23435 193 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 PAFAH1B2P68402 229 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 SELENOHQ8IZQ5 122 aaKnown RBP8.22□□□□□ -1.09
CCDC40-212ENST00000574799 OR10V1Q8NGI7 309 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 OR10G9Q8NGN4 311 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 OR10G7Q8NGN6 311 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 Q96M66 194 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 UQCR10Q9UDW1 63 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 A0A1W2PQM1 296 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 CLEC18AA5D8T8 446 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 IGHEP01854 428 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 OTX2P32243 289 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 KLF3P57682 345 aaPredicted RBP8.22□□□□□ -1.09
CCDC40-212ENST00000574799 C17orf67Q0P5P2 114 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 ACTL10Q5JWF8 245 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 FFAR4Q5NUL3 377 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 RABEPKQ7Z6M1 372 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 CLEC18CQ8NCF0 446 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 OR4B1Q8NGF8 309 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 OR1N1Q8NGS0 311 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 PSMF1Q92530 271 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 ALKBH4Q9NXW9 302 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 ZNF814B7Z6K7 855 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 NPIPA2E9PIF3 369 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 NPIPA3F8WFD2 350 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 SYNGR2O43760 224 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 SERF1AO75920 110 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 TMEM11P17152 192 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 SLC38A11Q08AI6 406 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 COA6Q5JTJ3 125 aaKnown RBP8.22□□□□□ -1.09
CCDC40-212ENST00000574799 UNQ5815/PRO19632Q6UWF5 114 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.22□□□□□ -1.09
CCDC40-212ENST00000574799 LRTM2Q8N967 370 aa8.22□□□□□ -1.09
CCDC40-212ENST00000574799 GVINP1Q7Z2Y8 2422 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 C5orf63A6NC05 138 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 A8MXE2 369 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 TSPAN2O60636 221 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 PDCD6O75340 191 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 TMEM50AO95807 157 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 CEACAM8P31997 349 aaPredicted RBP8.21□□□□□ -1.09
CCDC40-212ENST00000574799 MPLP40238 635 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 THBS3P49746 956 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 BPIFB3P59826 476 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 EIF3IQ13347 325 aaKnown RBP8.21□□□□□ -1.09
CCDC40-212ENST00000574799 FAM69BQ5VUD6 431 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 OR5L2Q8NGL0 311 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 OR4C12Q96R67 309 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 TCFL5Q9UL49 500 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 LAMTOR2Q9Y2Q5 125 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 KIAA1549Q9HCM3 1950 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 CABIN1Q9Y6J0 2220 aa8.21□□□□□ -1.09
CCDC40-212ENST00000574799 NRASP01111 189 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 PAX1P15863 534 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 COX5AP20674 150 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 MSR1P21757 451 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 SERF2P84101 59 aa8.21□□□□□ -1.1
CCDC40-212ENST00000574799 Q6ZVH6 145 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms