RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 DEFB108AA8MXU0 73 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 LGALS8O00214 317 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 PLAUP00749 431 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 CGB3P0DN86 165 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 CGB7P0DN87 165 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 SWI5Q1ZZU3 235 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 ZNF695Q8IW36 515 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 SLC7A5P1Q8MH63 180 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 DCUN1D4Q92564 292 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 RBPMSQ93062 196 aaKnown RBP23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 DYNLRB1Q9NP97 96 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 ZFP57Q9NU63 452 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 OR5AC2Q9NZP5 309 aa23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 RBM7Q9Y580 266 aaKnown RBP23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 HELZ2Q9BYK8 2649 aaKnown RBP23.64■■□□□ 1.38
CTDNEP1-210ENST00000574322 SIGLEC5O15389 551 aa23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 HTR2BP41595 481 aa23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 AP2S1P53680 142 aaPredicted RBP23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 ZNF645Q8N7E2 425 aa23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 GPHA2Q96T91 129 aa23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 DCTN5Q9BTE1 182 aa23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 OR2S2Q9NQN1 319 aa23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 DCAF16Q9NXF7 216 aa23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 UBQLN2Q9UHD9 624 aa23.64■■□□□ 1.37
CTDNEP1-210ENST00000574322 TRAV38-1A0A0B4J264 116 aa23.63■■□□□ 1.37
CTDNEP1-210ENST00000574322 TMEM178BH3BS89 294 aa23.63■■□□□ 1.37
CTDNEP1-210ENST00000574322 BCL2L11O43521 198 aa23.63■■□□□ 1.37
CTDNEP1-210ENST00000574322 ZNF672Q499Z4 452 aaPredicted RBP23.63■■□□□ 1.37
CTDNEP1-210ENST00000574322 DRAM1Q8N682 238 aa23.63■■□□□ 1.37
CTDNEP1-210ENST00000574322 AQP10Q96PS8 301 aa23.63■■□□□ 1.37
CTDNEP1-210ENST00000574322 ADGRG4Q8IZF6 3080 aa23.63■■□□□ 1.37
CTDNEP1-210ENST00000574322 DOPEY1Q5JWR5 2465 aa23.63■■□□□ 1.37
CTDNEP1-210ENST00000574322 F2RL2O00254 374 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 TNFSF12O43508 249 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 HCFC1P51610 2035 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 GNMTQ14749 295 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 OR1S1Q8NH92 325 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 JPT1Q9UK76 154 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 KANTRA0A1W2PQU2 76 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 DEDDO75618 318 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 VDAC1P21796 283 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 RRNAD1Q96FB5 475 aaKnown RBP23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 RAB9BQ9NP90 201 aa23.62■■□□□ 1.37
CTDNEP1-210ENST00000574322 ROS1P08922 2347 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 ANKHD1Q8IWZ3 2542 aaKnown RBP23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 TANC2Q9HCD6 1990 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 GYPAP02724 150 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 EIF4EBP1Q13541 118 aaPredicted RBP23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 NMSQ5H8A3 153 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 DEFB108BQ8NET1 73 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 OR4D5Q8NGN0 318 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 CCL13Q99616 98 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 SPIN2AQ99865 258 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 SPIN2BQ9BPZ2 258 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 TMEM106BQ9NUM4 274 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 KCNS2Q9ULS6 477 aa23.61■■□□□ 1.37
CTDNEP1-210ENST00000574322 SPTBN1Q01082 2364 aaKnown RBP23.6■■□□□ 1.37
CTDNEP1-210ENST00000574322 RAI1Q7Z5J4 1906 aaPredicted RBP23.6■■□□□ 1.37
CTDNEP1-210ENST00000574322 RNF212BA8MTL3 300 aa23.6■■□□□ 1.37
CTDNEP1-210ENST00000574322 MBPP02686 304 aaPredicted RBP23.6■■□□□ 1.37
CTDNEP1-210ENST00000574322 RLN2P04090 185 aa23.6■■□□□ 1.37
CTDNEP1-210ENST00000574322 PPP1CCP36873 323 aaKnown RBP23.6■■□□□ 1.37
CTDNEP1-210ENST00000574322 S100A10P60903 97 aa23.6■■□□□ 1.37
CTDNEP1-210ENST00000574322 LIN7CQ9NUP9 197 aaKnown RBP23.6■■□□□ 1.37
CTDNEP1-210ENST00000574322 PPIAL4EA0A075B759 164 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 PPIAL4DF5H284 164 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 TNFRSF13BO14836 293 aaPredicted RBP23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 PPIAL4FP0DN26 164 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 SELLP14151 372 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 EDDM3BP56851 147 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 RFESDQ8TAC1 157 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 CORO2AQ92828 525 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 LINC00574Q9H8X3 128 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 PPIAL4AQ9Y536 164 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 ARFGEF3Q5TH69 2177 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 TENM4Q6N022 2769 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 NKX6-3A6NJ46 265 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 YPEL1O60688 119 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 NUP62P37198 522 aaPredicted RBP23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 UBA52P62987 128 aaKnown RBP23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 SMCO1Q147U7 214 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 MUC15Q8N387 334 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 OR51H1Q8NH63 302 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 EDARADDQ8WWZ3 215 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 YPEL2Q96QA6 119 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 PLEKHF2Q9H8W4 249 aa23.59■■□□□ 1.37
CTDNEP1-210ENST00000574322 DSCAML1Q8TD84 2053 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 LRRK2Q5S007 2527 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 A0A1B0GW55 424 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 SERPINE2P07093 398 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 DUX4L2P0CJ85 424 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 DUX4L3P0CJ86 424 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 DUX4L4P0CJ87 422 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 DUX4L5P0CJ88 424 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 DUX4L6P0CJ89 424 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 DUX4L7P0CJ90 424 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 LOXL3P58215 753 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 DUX4L9Q6RFH8 374 aaPredicted RBP23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 OR52M1Q8NGK5 317 aa23.58■■□□□ 1.37
CTDNEP1-210ENST00000574322 ABHD14BQ96IU4 210 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms